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El. knyga: Advances in Mathematical Chemistry and Applications: Volume 2

Edited by (University of Minnesota Duluth, USA), Edited by (Universidad de Pamplona, Colombia), Edited by (Universidad de los Andes, Colombia)
  • Formatas: PDF+DRM
  • Išleidimo metai: 11-Feb-2016
  • Leidėjas: Bentham Science Publishers
  • Kalba: eng
  • ISBN-13: 9781681080529
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  • Formatas: PDF+DRM
  • Išleidimo metai: 11-Feb-2016
  • Leidėjas: Bentham Science Publishers
  • Kalba: eng
  • ISBN-13: 9781681080529
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Advances in Mathematical Chemistry and Applications highlights the recent progress in the emerging discipline of discrete mathematical chemistry. Editors Subhash C. Basak, Guillermo Restrepo, and Jose Luis Villaveces have brought together 26 chapters written by 67 internationally renowned experts in these two volumes.Each volume comprises a wise integration of mathematical and chemical concepts and covers numerous applications in the field of drug discovery, bioinformatics, chemoinformatics, computational biology, mathematical proteomics, and ecotoxicology.Volume 2 explores deeper the topics introduced in Volume 1, with numerous additional topics such as topological approaches for classifying fullerene isomers; chemical reaction networks; discrimination of small molecules using topological molecular descriptors; GRANCH methods for the mathematical characterization of DNA, RNA and protein sequences; linear regression methods and Bayesian techniques; in silico toxicity prediction methods; drug design; integration of bioinformatics and systems biology, molecular docking, and molecular dynamics; metalloenzyme models; protein folding models; molecular periodicity; generalized topologies and their applications; and many more.Brings together both the theoretical and practical aspects of the fundamental concepts of mathematical chemistryCovers applications in different fields such as drug discovery, protection of human as well as ecological health, chemoinformatics, bioinformatics, toxicoinformatics, and computational biology, to name just a fewAbout half of the book focuses primarily on current work, new applications, and emerging approaches for the mathematical characterization of essential aspects of molecular structure, while the other half describes applications of structural approach to new drug discovery, virtual screening, protein folding, predictive toxicology, DNA structure, and systems biology
Foreword ix
Preface xi
List of Contributors
xv
Acknowledgements xix
1 Topological Efficiency Approach to Fullerene Stability - Case Study with C50
3(21)
Ante Graovac
Ali Reza Ashrafi
Ottorino Ori
2 Similarity in Chemical Reaction Networks: Categories, Concepts and Closures
24(31)
Andres Bernal
Eugenio Llanos
Wilmer Leal
Guillermo Restrepo
3 Discrimination of Small Molecules Using Topological Molecular Descriptors
55(19)
Chandan Raychaudhury
Debnath Pal
4 The Periodicity of Molecules
74(22)
Fanao Kong
Weiqiang Wu
Na Ji
C. L. Calson
5 The GRANCH Techniques for Analysis of DNA, RNA and Protein Sequences
96(29)
Ashesh Nandy
6 Linear Regression, Model Averaging, and Bayesian Techniques for Predicting Chemical Activities from Structure
125(23)
Jarad B. Niemi
Gerald J. Niemi
7 Marine Algal Toxicity Models with Dunaliella tertiolecta: In Vivo and In Silico
148(31)
Melek T. Sacan
Marjana Novic
M. Doga Erturk
Nikola Minovski
8 Anti-Tubercular Drug Designing Using Structural Descriptors
179(12)
Manish C. Bagchi
Payel Ghosh
9 Integrating Bioinformatics and Systems Biology for Exploring Novel Lipid Pathways in Infectious Diseases
191(30)
Sonali Shinde
Vineetha Mandlik
Shailza Singh
10 Applications of Molecular Docking and Molecular Dynamics on the Inhibition of Quorum Sensing Systems
221(22)
Santiago Medina
Susana Casas
Mariana Restrepo
Alejandro Alvarez
Adriana J. Bernal
Andres Fernando Gonzalez Barrios
11 Designing Models for Metalloenzymes
243(22)
James F. Weston
12 The Multi-Factor Coupled Protein Folding: Insights from Molecular Dynamics Simulations
265(35)
Xiaomin Wu
Gang Yang
Lijun Zhou
13 Generalized Topologies: Hypergraphs, Chemical Reactions, and Biological Evolution
300(29)
Christoph Flamm
Barbel M. R. Stadler
Peter F. Stadler
Subject Index 329