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El. knyga: Biocontrol Mechanisms of Endophytic Microorganisms

Edited by (Associate Professor, School of Biosciences, Mahatma Gandhi University, Kottayam, Kerala, India), Edited by (Research Scholar, School of Biosciences, Mahatma Gandhi Universit), Edited by (Professor, Amity Institute of Biotechnology, Amity University, India)
  • Formatas: PDF+DRM
  • Išleidimo metai: 23-Nov-2021
  • Leidėjas: Academic Press Inc
  • Kalba: eng
  • ISBN-13: 9780323884792
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Biocontrol Mechanisms of Endophytic MicroorganismsDidesnis paveikslėlis
  • Formatas: PDF+DRM
  • Išleidimo metai: 23-Nov-2021
  • Leidėjas: Academic Press Inc
  • Kalba: eng
  • ISBN-13: 9780323884792
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Biocontrol Mechanisms of Endophytic Microorganisms introduces endophytic microorganisms, colonization, diversity and distribution, describes the isolation and identification of endophytic microorganisms by traditional cultivation and by next generation sequencing technologies, and covers biocontrol mechanisms, bacterial priming, endophytic based methods, the significance on fungi, and metabolite based formulations. The book concludes with chapters on biofilms, microbiota and safety issues of microorganisms.

The intensive use of chemicals to control these plant pathogens has resulted in negative consequences such as the release of toxic chemicals in the environment, reduced soil fertility and human health problems. Therefore, environmentally-friendly and sustainable replacement of chemical fertilizers or pesticides is highly challenging.

List of contributors
xiii
Introduction xvii
Chapter 1 Colonization, diversity, and distribution of endophytic microbial communities in different parts of plants
1(30)
Jasim Basheer
1.1 Introduction
1(1)
1.2 The rhizosphere as a microbial contributor
2(1)
1.3 Attachment and colonization of endophytes
3(2)
1.4 Mechanisms involved in endophytic colonization
5(8)
1.5 Diversity and distribution of endophytic microbial communities
13(2)
1.6 Future perspective
15(16)
References
15(16)
Chapter 2 Recent trends in characterization of endophytic microorganisms
31(24)
Ayesha T. Tahir
Jun Kang
Musfirah Bint-e-Mansoor
Javeria Ayub
Zakira Naureen
Fauzia Yusuf Hafeez
2.1 Introduction
31(1)
2.2 Conventional characterization of endophytes
32(2)
2.2.1 Morphological characterization
33(1)
2.2.2 Biochemical and physiological characterization
34(1)
2.2.3 Plant growth promoting and biocontrol activities
34(1)
2.3 Characterization of endophytes using modern techniques
34(11)
2.3.1 Genomics/metagenomics
34(5)
2.3.2 Transcriptomics/metatranscriptomics
39(2)
2.3.3 Proteomics/metaproteomics
41(1)
2.3.4 Metabolomics/meta metabolomics
42(1)
2.3.5 Holo-OMICS: multi-OMICS integration from host and microbiota
43(2)
2.4 Conclusion and perspective
45(10)
References
45(10)
Chapter 3 Biocontrol mechanism of endophytic microorganisms
55(20)
Gayathri Segaran
Saranya Shankar
Mythili Sathiavelu
3.1 Introduction
55(1)
3.2 Endophytes and its role
56(1)
3.3 Symbiotic relationship between host and endophyte
56(1)
3.4 An overview of endophytes as a biocontrol agent
57(2)
3.5 Mycoparasitic interaction between biocontrol agent and plant pathogens
59(1)
3.6 Antibiosis and secondary metabolite-mediated plant protection
60(3)
3.7 Protection of a plant through the secretion of lytic enzymes
63(1)
3.8 Competition for niche and nutrition
64(2)
3.9 Induction of host resistance by endophytes
66(2)
3.10 Indirect inhibition via siderophore production
68(1)
3.11 Inhibition through phytohormone activity
68(1)
3.12 Conclusion and future perspective
69(6)
Acknowledgments
69(1)
References
69(6)
Chapter 4 Antimicrobial metabolites from endophytic microorganisms and its mode of action
75(14)
Saranya Shankar
Gayathri Segaran
Mythili Sathiavelu
4.1 Introduction
75(1)
4.2 Importance of endophytic microorganisms as biocontrol agents
76(1)
4.3 Endophytic bacteria
77(1)
4.4 Endophytic fungi
77(6)
4.5 Endophytic actinomycetes
83(1)
4.6 Endophytic microorganisms from the plant as a resource of secondary metabolites
83(1)
4.7 Effects of phytopathogens on plant community
84(1)
4.8 Conclusion
84(5)
Acknowledgments
85(1)
References
85(4)
Chapter 5 Induction of plant defense response by endophytic microorganisms
89(28)
R. Aswani
Roshmi Thomas
E.K. Radhakrishnan
5.1 Introduction
89(1)
5.2 Endophytic microorganisms
90(1)
5.3 Colonization of endophytic microorganisms
91(1)
5.4 Association of endophytes with plants
91(1)
5.5 Identification of endophytic microbial diversity
91(3)
5.5.1 Culture-dependent methods
92(1)
5.5.2 Culture-independent methods
92(2)
5.6 Mechanisms of endophytic microorganisms in plant disease management
94(3)
5.6.1 Direct mechanisms of plant disease protection by endophytes
94(2)
5.6.2 Indirect mechanisms of plant disease protection by endophytes
96(1)
5.7 Modulation of plant immune system by endophytic and pathogenic microorganisms
97(4)
5.8 Priming methods and applications of endophytes in agriculture
101(2)
5.9 Conclusion
103(14)
Acknowledgment
103(1)
References
103(12)
Further Reading
115(2)
Chapter 6 Plant disease management through microbiome modulation
117(20)
R. Aswani
E.K. Radhakrishnan
6.1 Introduction
117(1)
6.2 Priority effects in plant microbiome assembly
118(1)
6.3 Core microbiome of plants
119(1)
6.4 Beneficial features of plant microbiome
119(3)
6.5 Plant microbiome as a tool for plant disease management
122(5)
6.5.1 Endophytes as biological control agents
124(3)
6.6 Modulation of plant microbiome through microbial inoculation
127(1)
6.7 Conclusion
128(9)
Acknowledgment
129(1)
References
129(8)
Chapter 7 Improved designing and development of endophytic bioformulations for plant diseases
137(30)
Prasanna Rajan
Reedhu Raj
Sijo Mathew
Elizabeth Cherian
A. Remakanthan
7.1 Introduction
137(2)
7.1.1 Pesticides a burning issue
138(1)
7.1.2 Think green to save future
138(1)
7.1.3 Are endophytes a promising candidate?
138(1)
7.2 Mechanism deployed by endophytes in plant protection
139(7)
7.2.1 Antibiosis
139(1)
7.2.2 Production of hydrolyzing enzymes
140(1)
7.2.3 Production of phytohormones
141(1)
7.2.4 Phosphate solubilization
142(1)
7.2.5 Siderophore production
143(1)
7.2.6 ACC utilization
143(1)
7.2.7 Competition with pathogens
144(1)
7.2.8 Increased lignin biosynthesis
144(1)
7.2.9 Induction of plant resistance
144(1)
7.2.10 Stimulation of plant secondary metabolite production
145(1)
7.2.11 Promoting plant growth and physiology
145(1)
7.2.12 Hyperparasitism and predation
145(1)
7.3 Techniques for improvement of MBCAs
146(6)
7.3.1 Molecular methods for the improvement of microbial biocontrol agents
146(3)
7.3.2 Combined application of MBCAs
149(1)
7.3.3 Enhancing stress tolerance capability of MBCAs
150(1)
7.3.4 Addition of organic amendments
151(1)
7.4 Formulation procedure
152(4)
7.4.1 Drying methods
153(1)
7.4.2 Encapsulation methods
154(2)
7.5 Future prospects
156(11)
References
157(8)
Further Reading
165(2)
Chapter 8 Novel trends in endophytic applications for plant disease management
167(14)
Priya Jaiswal
Sristi Kar
Sankalp Misra
Vijaykant Dixit
Shashank Kumar Mishra
Puneet Singh Chauhan
8.1 Introduction
167(1)
8.2 Endophytic microorganisms as biocontrol agents
168(3)
8.3 Biocontrol mechanisms of endophytes
171(1)
8.4 Competition: an eco-friendly reprisal program
172(1)
8.5 Antibiosis: strategy for effective biocontrol
172(1)
8.6 Production of lipopeptides: another mechanism for suppressing pathogens
173(1)
8.7 Production of 6-endotoxins: natural plan for biocontrol
173(1)
8.8 Lytic enzymes: arsenals of natural origin
174(1)
8.9 Siderophore production: indirect mechanism of biocontrol
174(1)
8.10 Induced systemic resistance (ISR): unique reinforcement strategy
175(1)
8.11 Conclusion
175(6)
Acknowledgment
176(1)
References
176(5)
Chapter 9 Biocontrol applications of microbial metabolites
181(36)
Dibya Jyoti Hazarika
Merilin Kakoti
Ashok Bhattacharyya
Robin Chandra Boro
9.1 Introduction
181(1)
9.2 Microbes for biological control
182(1)
9.3 Antifungal metabolites from microbes
183(9)
9.4 Antibacterial metabolites from microbes
192(2)
9.5 Insecticidal and nematicidal metabolites from microbes
194(1)
9.6 Bioformulations for biocontrol activity
195(2)
9.6.1 Strategies for discovering microbial metabolites
196(1)
9.7 Different approaches to enhance the synthesis of microbial secondary metabolites
197(2)
9.8 Conclusion
199(18)
References
200(17)
Chapter 10 Applications of microbial biosurfactants in biocontrol management
217(22)
Pooja Singh
Vinay Rale
10.1 Introduction
217(1)
10.2 Biosurfactants
218(3)
10.2.1 Applications of biosurfactants: a golden molecule for agriculture
219(2)
10.3 Biosurfactants as antimicrobial and biocontrol agents
221(10)
10.3.1 Glycolipids for biocontrol of pathogens
223(5)
10.3.2 Applications of lipopeptides in agriculture
228(3)
10.4 Conclusion: challenges and opportunities
231(8)
References
232(7)
Chapter 11 Microbial biofilms in plant disease management
239(22)
Amrita Patil
Rashmi Gondi
Vinay Rale
Sunil D. Saroj
11.1 Introduction
239(1)
11.2 Plant growth---promoting bacteria and plant health
240(12)
11.2.1 Significance of PGPR
240(1)
11.2.2 PGPR and quorum sensing
241(1)
11.2.3 PGPR biofilms and plant health
241(11)
11.3 Conclusion
252(9)
Acknowledgment
252(1)
Funding
252(1)
References
252(9)
Chapter 12 Plant microbiota: a prospect to Edge off postharvest loss
261(24)
Poonam Patel
Sushil Kumar
Ajay Kumar
12.1 Introduction
261(1)
12.2 Postharvest loss
261(3)
12.3 Microbiota
264(2)
12.3.1 Plant microbiota
264(1)
12.3.2 Diversification in plant microbiota
264(1)
12.3.3 Bacteria
264(1)
12.3.4 Fungus and archaea
265(1)
12.4 Prospective roles of microbiota in postharvest loss
266(3)
12.4.1 Biocontrol products used to control postharvest losses: on way to commercialization
269(1)
12.5 Mode of action of microbiota in postharvest
269(7)
12.5.1 Biotechnological advancements aided to microbiota---postharvest loss
275(1)
12.6 Conclusion
276(9)
References
276(9)
Chapter 13 Endophytic microorganisms: utilization as a tool in present and future challenges in agriculture
285(18)
Alisha Gupta
Meenakshi Raina
Deepak Kumar
13.1 Introduction
285(2)
13.2 Biodiversity and distribution of endophytic microorganism
287(1)
13.3 Plants and associated endophytes
287(5)
13.3.1 Endophytic bacteria
288(2)
13.3.2 Endophytic fungi
290(2)
13.3.3 Endophytic actinomycetes
292(1)
13.4 Endophytes in sustainable agriculture
292(6)
13.4.1 Endophytes as plant growth promoters
292(3)
13.4.2 Endophytes as biocontrol agent
295(1)
13.4.3 Endophytes in bioremediation and phytoremediation
296(1)
13.4.4 Endophytic microorganism against for alleviation of biotic and abiotic stress
297(1)
13.5 Conclusion
298(5)
Acknowledgements
299(1)
References
299(4)
Chapter 14 Microbially synthesized nanoparticles: aspect in plant disease management
303(24)
Joorie Bhattacharya
Rahul Nitnavare
Aishwarya Shankhapal
Sougata Ghosh
14.1 Introduction
303(2)
14.2 Nanoparticles for plant disease control
305(1)
14.3 Bacteriogenic nanoparticles
305(10)
14.4 Mycogenic nanoparticles
315(4)
14.5 Future prospects
319(2)
14.6 Conclusion
321(6)
References
321(6)
Index 327
Dr. E.K. Radhakrishnan is currently working as an associate professor at the School of Biosciences, Mahatma Gandhi University, Kottayam and as a director at Business innovation and incubation Centre (BIIC.) During his 12 years of research, he has published 143 research publications, 43 book chapters, and 3 review papers. He has edited five books and has several books in progress. He has also been invited to deliver talks at various national and international conferences and seminars. His research areas include plantmicrobe interactions, microbial natural products, microbial synthesis of metal nanoparticles, antimicrobial resistance gene prediction, and development of polymer-based nanocomposites with antimicrobial effects for food packaging and medical ap?plications. Dr. Ajay Kumar is currently working as an assistant professor at Amity Institute of Biotechnology, Amity University, Noida, India. Dr. Kumar completed his tenure (2018-2022) as a visiting scientist from Agriculture Research Organization, Volcani Center, Israel and doctoral research from Department of Botany, Institute of Science, Banaras Hindu University, Varanasi, India on the theme "Plant microbe interaction". In his research tenures, Dr. Kumar has published more than 235 scientific contributions in the form of research and review articles, books or book chapters with the leading International Journals or Publishers. He has wide area of research experience, especially in the field of Plant-Microbe Interactions, Microbial biocontrol, Postharvest management of fruits, Microbial endophytes related with the medicinal plants and cyanobacteria-pesticides interactions. Dr. Kumar actively engaged in editing book with the leading publisher like Elsevier, Springer, CRC Press, Willey and edited more than 48 books and currently serving as an Associate editor in Frontier in Microbiology, BMC Microbiology and special guest editor in Microorganisms or Plants MDPI, Journal. R. Aswani has completed her PhD in microbiology at the School of Biosciences, Mahatma Gandhi University, Kottayam, India. After her MSc in microbiology, she completed an MPhil in biosciences and has authored 26 publications, 2 review articles, and 8 book chapters. She edited one book titled Biocontrol Mechanisms of Endophytic Microorganisms, published by Elsevier. Her area of research is the role of microbes in biocontrol mechanisms and induction of plant defense response by plant-associated microorganisms.
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