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Chemistry for the Biosciences: The Essential Concepts 4th Revised edition [Minkštas viršelis]

4.02/5 (47 ratings by Goodreads)
(Oxford, UK), (Principal Lecturer, Oxford Brookes University)
  • Formatas: Paperback / softback, 776 pages, aukštis x plotis x storis: 265x195x30 mm, weight: 1834 g
  • Išleidimo metai: 23-Apr-2021
  • Leidėjas: Oxford University Press
  • ISBN-10: 0198791046
  • ISBN-13: 9780198791041
Kitos knygos pagal šią temą:
  • Formatas: Paperback / softback, 776 pages, aukštis x plotis x storis: 265x195x30 mm, weight: 1834 g
  • Išleidimo metai: 23-Apr-2021
  • Leidėjas: Oxford University Press
  • ISBN-10: 0198791046
  • ISBN-13: 9780198791041
Kitos knygos pagal šią temą:
Chemistry enables our eyes to detect the world around us; it determines whether something tastes sweet or sour; it helps genetic information pass accurately from one generation to the next. Ultimately, chemistry powers life itself. We don't need to dig very deep to answer the question: why do biologists need chemistry?

Building on the success of the first three editions, Chemistry for the Biosciences introduces students to all the chemistry they need to understand the biological world. Renowned for its clear and straightforward explanations, the book uses everyday examples and analogies throughout to help students get to grips with chemical concepts, and presents them in context of biological systems wherever possible so they can see how chemistry relates to their wider studies.

With topics drawn from organic, physical, and inorganic chemistry, students will encounter a broad range of essential concepts. Chemistry for the Biosciences includes many learning features - both in print and online - to help students grasp these concepts as quickly and thoroughly as possible. From the self-check questions throughout each chapter to help consolidate learning, to the Chemical Toolkits and Maths Tools that help students explore terminology, methods, and numerical skills that may be unfamiliar, the book is written to be a true course companion for students on biological and biomedical science degrees - one that will help them not only remember the essentials, but really understand them, setting students up for success in their later studies.

Digital formats and resources The fourth edition is available for students and institutions to purchase in a variety of formats, and is supported by online resources. - The ebook offers a mobile experience and convenient access along with functionality tools, navigation features, and links that offer extra learning support: www.oxfordtextbooks.co.uk/ebooks - The extensive online resources feature:

For registered adopters: A list of student learning objectives; Figures from the book in electronic format, ready to download; A test bank of questions, with feedback linked to the text.

For students: A List of learning objectives; Multiple-choice questions to aid exam preparation and revision; Full solutions to self-check questions; Data analysis and numerical practice worksheets; Links to YouTube video tutorials that provide fuller explanations of a range of numerical concepts.
Periodic table of the elements i
Acknowledgements xxi
Welcome to Chemistry for the Biosciences xxii
1 Introduction: why biologists need chemistry
1(16)
1.1 The chemical basis of biology
1(2)
1.2 Science: exploring our world
3(1)
I'm a bioscientist: what has chemistry to do with me?
4(1)
1.3 Water: the chemical of life
4(3)
1.4 The essential concepts that unify chemistry and biology
7(4)
1.5 The language of chemistry
11(3)
The world of chemical nomenclature
11(1)
Units: making sense of numbers
12(1)
Using prefixes
12(1)
Symbols
13(1)
1.6 Quantitative reasoning
14(3)
Maths Tool 1 How do we work with powers?
16(1)
2 Atoms: the foundations of life
17(35)
2.1 The chemical elements
17(3)
The periodic table
18(1)
What does `element' really mean?
18(2)
2.2 Atomic composition
20(3)
Protons, electrons, and electrical charge
21(1)
How do we identify the composition of an atom?
21(2)
The variety of life: not so varied after all?
23(1)
2.3 The formation of ions: varying the number of electrons
23(4)
Ionization energies: how easy is it to let go?
25(2)
2.4 Isotopes: varying the number of neutrons
27(4)
How do we identify different isotopes?
27(1)
The relative abundances of different isotopes
27(3)
How do protons determine chemical identity?
30(1)
2.5 Atomic structure
31(3)
The Bohr model of atomic structure
31(1)
The quantum mechanical model of atomic structure
32(2)
2.6 The energy of atoms
34(5)
How much energy do different orbitals possess?
35(1)
How do electrons fill up orbitals?
35(1)
What is an atom's electronic configuration?
36(1)
How do subshells fill?
37(2)
2.7 Valence shells and valence electrons: an atom's outer limits
39(5)
How do we use Lewis dot symbols to represent valence shells?
41(1)
How do valence electrons exhibit periodicity?
42(2)
2.8 Electron excitation: moving between orbitals
44(8)
The electromagnetic spectrum
47(5)
3 Compounds and chemical bonding: bringing atoms together
52(43)
3.1 The formation of compounds
52(4)
The chemical bond: bridging the gap between atoms
53(1)
Which electron configuration is most stable?
53(3)
3.2 Bond formation: how are valence electrons redistributed?
56(4)
Electronegativity: how easily can electrons be transferred?
57(3)
Ionic and covalent bonding in nature: which is more prevalent?
60(1)
3.3 The ionic bond: transferring electrons
60(7)
Chemical Toolkit 1 Writing down the composition of compounds: the chemical formula
62(1)
The filling of shells by ionic bonding: how many electrons are transferred?
63(2)
The transfer of multiple electrons between atoms
65(1)
How are charges balanced in ionic compounds?
66(1)
3.4 The covalent bond: sharing electrons
67(6)
Chemical Toolkit 2 How to identify the components of a covalent compound: the molecular formula
68(1)
How are electrons distributed in covalent bonds?
69(1)
Non-bonding pairs of electrons
69(2)
Chemical Toolkit 3 Using Lewis structures to represent molecules
71(2)
3.5 Blurring the boundaries: polarized bonds
73(3)
How strongly is a bond polarized?
74(2)
3.6 Coordinate bonding: covalent bonding with a twist
76(1)
3.7 Valency: how many bonds can an atom form?
77(5)
The formation of multiple covalent bonds
79(1)
How can valency be satisfied with multiple bonds?
80(1)
Hypervalency: going beyond the octet rule
81(1)
3.8 Molecular orbitals in covalent compounds
82(4)
Sigma and pi orbitals
85(1)
3.9 Aromatic compounds: the world of conjugated bonds
86(4)
Delocalization in non-conjugated systems
89(1)
3.10 Polyatomic ionic compounds: bringing ionic and covalent bonds together
90(5)
4 Molecular interactions: holding it all together
95(38)
4.1 Chemical bonding versus non-covalent interactions
95(4)
Why are molecular interactions significant?
96(2)
Intramolecular versus intermolecular interactions
98(1)
4.2 Electrostatic forces: the foundations of molecular interactions
99(3)
How can a molecule with polar bonds be non-polar?
101(1)
4.3 The van der Waals interaction
102(8)
Dispersion forces
103(3)
Permanent dipolar interactions
106(1)
Induced dipolar interactions
107(1)
Steric repulsion
107(1)
Balancing attraction and repulsion: the van der Waals interaction
108(2)
4.4 Beyond van der Waals: other biologically essential interactions
110(12)
Hydrogen bonds
110(6)
Ionic forces
116(3)
Hydrophobic forces
119(3)
Holding it together: a summary of non-covalent interactions in biological molecules
122(1)
4.5 Life in water: how molecular interactions influence water solubility
122(4)
The role of solvation in aqueous systems
123(2)
Water is not the only solvent
125(1)
How do molecular interactions influence the design of drugs?
126(1)
4.6 Breaking molecular interactions: the three phases of matter
126(7)
How is the phase of a substance changed?
128(1)
The transition between phases
129(1)
How do non-covalent interactions influence the phase of a substance?
130(3)
5 Moles, concentrations, and dilutions: making sense of chemical numbers
133(38)
5.1 The mole
133(4)
The relationship between molar quantity and mass: molar mass
134(1)
The molar mass of a compound
135(1)
How do we calculate the amount of an element in a sample?
136(1)
5.2 Concentrations: working with amounts in solution
137(7)
How do we calculate the amount of substance in solution?
139(1)
How do we prepare a solution of known concentration?
140(2)
How do we prepare solutions according to percentage by weight?
142(1)
How do we calculate the concentration of a solution?
143(1)
5.3 Changing the concentration: solutions and dilutions
144(7)
How do we work out the concentration of a diluted solution?
144(2)
How much water do we add to dilute a solution to a desired concentration?
146(2)
Serial dilutions
148(3)
5.4 How do we measure concentrations?
151(20)
Titrations: using chemical reactions to measure concentrations
152(4)
UV-visible spectroscopy
156(6)
Atomic spectroscopy
162(7)
Maths Tool 2 How do we rearrange equations?
169(2)
6 Hydrocarbons: the framework of life
171(25)
6.1 What is organic chemistry?
171(4)
Carbon in our world
172(1)
Why is carbon the central biological element?
173(1)
What are the key components of organic compounds?
173(2)
6.2 Hydrocarbons: the framework of organic compounds
175(10)
Chemical Toolkit 4 Chemical notation: drawing chemical structures
178(3)
How do we name the hydrocarbons?
181(2)
The shape of organic compounds
183(2)
6.3 Members of the hydrocarbon family
185(7)
Thealkanes
185(5)
The alkenes: hydrocarbons with a double carbon-carbon bond
190(1)
The alkynes: hydrocarbons with a triple carbon-carbon bond
191(1)
The aryl group: a special hydrocarbon group
191(1)
6.4 Physical and chemical properties of the hydrocarbons
192(4)
Are hydrocarbons soluble in water?
193(1)
Chemical properties of the hydrocarbons
194(2)
7 Functional groups: adding function to the framework of life
196(33)
7.1 Adding functional groups to the hydrocarbon framework
196(4)
How do functional groups affect the properties of organic compounds?
197(2)
Functional groups versus the hydrocarbon framework: a balancing act
199(1)
7.2 Organic compounds with oxygen-based functional groups
200(16)
The hydroxyl group
201(3)
The alkoxy group
204(2)
The carbonyl group
206(5)
The carboxyl group
211(2)
The ester group
213(3)
7.3 Organic compounds with nitrogen-based functional groups
216(8)
The amino group
217(5)
The amide group
222(2)
7.4 The sulfur-based functional group: the thiol group
224(5)
8 Molecular shape and structure: life in three dimensions
229(31)
8.1 What influences the shape of molecules?
230(3)
Bond lengths
230(1)
Atomic radii
230(3)
Bond type
233(1)
8.2 Bond angles
233(8)
Valence shell electron pair repulsion (VSEPR)
234(6)
What is the geometry of atoms in larger molecules?
240(1)
8.3 Hybridization of atomic orbitals during bond formation
241(8)
What hybridization occurs during double and triple bond formation?
243(4)
Do orbitals containing non-bonding pairs of valence electrons become hybridized?
247(2)
8.4 Bond rotation and conformation
249(11)
Conformation versus configuration
251(2)
How is bond rotation limited?
253(4)
Chemical Toolkit 5 How do we draw cyclic structures?
257(3)
9 Isomerism: generating chemical variety
260(37)
9.1 What are isomers?
260(2)
Structural isomers
261(1)
Stereoisomers
261(1)
9.2 Structural isomers
262(7)
How do we distinguish structural isomers?
262(1)
Generating structural isomers: why does the shape of the carbon framework matter?
262(1)
Generating structural isomers: why does the positioning of functional groups matter?
263(2)
Chemical Toolkit 6 How do we use nomenclature to specify the structure of compounds?
265(2)
Structural isomers can belong to different chemical families
267(1)
Tautomers
268(1)
9.3 Cis-trans isomers
269(7)
Cis-trans isomerism in molecules with a double bond
270(4)
The E/Z nomenclature
274(1)
Cis-trans isomerism in cyclic structures
275(1)
9.4 Enantiomers
276(10)
Chirality
278(3)
Enantiomers with multiple chirality centres
281(1)
How do we distinguish one enantiomer from its mirror image?
282(1)
Chemical Toolkit 7 The R/S nomenclature for distinguishing between enantiomers
283(3)
9.5 Chirality in biological systems
286(3)
Are pairs of enantiomers equally active in biological systems?
288(1)
9.6 The chemistry of isomers
289(8)
The biological chemistry of enantiomers
291(1)
The impact of chirality on medicinal chemistry
292(5)
10 Biological macromolecules: the infrastructure of life
297(52)
10.1 Amino acids and proteins
297(19)
The composition of amino acids
298(1)
How are polypeptides formed?
299(4)
How do polypeptides have polarity?
303(1)
The shape and structure of polypeptides
304(9)
How is the structure of a protein stabilized?
313(2)
The hierarchy of biological structure
315(1)
10.2 Nucleic acids
316(14)
What are the components of a nucleotide?
316(3)
How are nucleic acids formed?
319(4)
The shape and structure of nucleic acids
323(5)
Nucleic acids: nature's energy stores
328(2)
10.3 Carbohydrates
330(8)
What is the structure of a monosaccharide?
331(3)
The shape and structure of larger sugars
334(1)
The structural diversity of polysaccharides
335(3)
10.4 Lipids
338(11)
Steroids
338(1)
Cholesterol
339(2)
Triacylglycerols
341(3)
Glycerophospholipids
344(5)
11 Metals in biology: life beyond carbon
349(26)
11.1 What are metals?
349(4)
Which elements are metals?
350(3)
11.2 Metals in communication and control
353(8)
The role of metals in nerve impulses
353(3)
How is calcium involved in cell signalling?
356(5)
11.3 Metals as biological building materials
361(1)
11.4 How do metals contribute to the structure and function of proteins?
361(6)
The impact of metals on molecular structure: the zinc finger motif
362(1)
Metals as binding sites
363(4)
11.5 Metals in cell metabolism
367(8)
The role of metals in biochemical reactions
368(3)
The role of trace metals in biology
371(1)
The role of metals in energy transduction
372(3)
12 Chemical reactions, oxidation, and reduction: bringing molecules to life
375(45)
12.1 What is a chemical reaction?
375(6)
The stoichiometry of chemical reactions
376(2)
How do we balance a reaction equation?
378(1)
How do we use balanced reaction equations quantitatively?
379(2)
12.2 The molecular basis of chemical reactions
381(3)
How do valence electrons move during chemical reactions?
382(1)
How do we depict the movement of electrons?
383(1)
12.3 Heterolytic reactions
384(6)
Nucleophiles
385(1)
Electrophiles
386(1)
What is a nucleophilic attack?
387(1)
How are bonds polarized during heterolytic reactions?
387(3)
12.4 Homolytic reactions
390(6)
The stages of a homolytic reaction
391(3)
Free radicals in biological systems
394(1)
Homolytic versus heterolytic cleavage
395(1)
12.5 Oxidation and reduction
396(3)
Redox reactions: the transfer of electrons
397(2)
12.6 The standard reduction potential
399(6)
How do we measure the standard reduction potential?
400(1)
Using the standard reduction potential: the relative strength of reducing agents
401(3)
Which species will be the reducing agent?
404(1)
12.7 Oxidation numbers
405(5)
How do we assign oxidation numbers to track redox reactions?
405(4)
How should we interpret the `loss of electrons' during redox reactions?
409(1)
12.8 Oxidation and reduction in biological systems
410(10)
Electron carriers in biological systems: some examples
413(2)
Oxidation and reduction during enzyme catalysis
415(5)
13 Reaction mechanisms: the chemical changes that drive the chemistry of life
420(51)
13.1 An introduction to reaction mechanisms
420(4)
Transition states and intermediates
421(3)
13.2 Substitution reactions
424(7)
Aliphatic nucleophilic substitution reactions
424(1)
One-step versus two-step substitution
425(3)
Electrophilic substitution reactions
428(3)
13.3 Nucleophilic addition reactions
431(10)
How are non-polar molecules added across a double bond?
432(2)
Addition across a carbonyl double bond
434(1)
Hydration of carbonyl groups
435(2)
The reaction of carbonyl groups to form acetals and ketals
437(2)
The aldol reaction
439(2)
13.4 Elimination reactions
441(5)
One-step versus two-step elimination
443(1)
What determines whether an elimination or a substitution reaction occurs?
444(2)
13.5 Condensation
446(4)
Esterification is also a condensation reaction
447(3)
13.6 Hydrolysis: breaking apart what condensation has joined
450(4)
Powering the body: the hydrolysis of ATP
451(3)
13.7 Biochemical reactions: from food to energy
454(17)
The reaction mechanisms underpinning glycolysis
454(9)
Glycolysis: a summary
463(1)
Beyond glycolysis: how does the oxidation of glucose ultimately power the cell?
463(2)
Oxidative phosphorylation: the reduction of oxygen at the end of the line
465(6)
14 Energy: what makes reactions go?
471(49)
14.1 What is energy?
471(7)
The conservation of energy
472(1)
Kinetic energy
473(2)
Potential energy
475(3)
14.2 Energy transfer
478(5)
How is energy transferred as work?
480(1)
How is energy transferred as heat?
481(2)
What is the difference between heat and temperature?
483(1)
14.3 Energy changes during chemical reactions
483(13)
Chemical Toolkit 8 Standard states: making sense of measurements
486(1)
How do we evaluate the energy change during a chemical reaction?
487(2)
How do we calculate an enthalpy change using bond energies?
489(3)
Enthalpy changes are given different names according to the processes they represent
492(1)
How do we calculate an enthalpy change using standard enthalpy changes of formation?
492(2)
How do we measure the enthalpy of a reaction directly?
494(1)
Enthalpy changes in biological systems
495(1)
The enthalpy change as a measure of the stability of chemical compounds
495(1)
14.4 Entropy: the distribution of energy as the engine of change
496(7)
Entropy in chemical and biological systems
498(2)
What is the link between entropy and energy?
500(1)
How does temperature influence entropy?
501(2)
14.5 What are spontaneous reactions-and why are they important?
503(6)
The entropy of spontaneous reactions
505(2)
How do biological systems obey the Second Law?
507(2)
14.6 Gibbs free energy: the driving force of chemical reactions
509(11)
The Gibbs free energy of spontaneous reactions
512(2)
The impact of Gibbs free energy on cell metabolism
514(6)
15 Equilibria: how far do reactions go?
520(42)
15.1 Equilibrium reactions
520(6)
Do equilibrium reactions result in change?
522(2)
Does it matter which reaction is `forward' and which is `back'?
524(2)
15.2 Forward and back reactions: where is the balance struck?
526(9)
What does the equilibrium constant tell us?
526(2)
How do we calculate the equilibrium constant using partial pressures?
528(2)
What does the magnitude of an equilibrium constant tell us?
530(3)
How do equilibrium constants depend on temperature and concentration?
533(2)
15.3 The reaction quotient
535(3)
How can we use the reaction quotient to predict the direction of a reaction?
536(2)
15.4 Binding reactions in biological systems
538(4)
What does the dissociation constant tell us?
540(2)
15.5 Perturbing an equilibrium
542(9)
Changing the concentration of the system
543(4)
Changing the pressure or volume of the system
547(2)
Changing the temperature
549(2)
15.6 The impact of free energy on chemical equilibria
551(11)
What is the free energy of a reaction at equilibrium?
552(1)
The van't Hoff isotherm: linking K and ΔG
553(1)
How do we use the van't Hoff isotherm to predict spontaneity?
553(2)
How do we use the van't Hoff isotherm to predict the position of equilibrium?
555(3)
Maths Tool 3 Handling brackets
558(1)
Maths Tool 4 The exponential and logarithmic functions
559(3)
16 Kinetics: what affects the speed of a reaction?
562(48)
16.1 The rate of reaction
562(11)
What is the rate of a reaction?
563(2)
How do we measure the rate of a reaction?
565(2)
The rate of equilibrium reactions
567(2)
The order of reactions: what is the relationship between reaction rate and concentration?
569(2)
The half-life of a reaction
571(2)
16.2 The collision theory of reaction rates
573(3)
Increasing the reaction rate by increasing the concentration
574(1)
Increasing the reaction rate by increasing the temperature
574(2)
16.3 The activation energy: getting reactions started
576(3)
Breaking the energy barrier: the transition state
578(1)
16.4 Catalysis: changing the reaction pathway
579(3)
The role of catalysts in chemical reactions
579(3)
16.5 Enzymes: the biological catalysts
582(10)
The specificity of enzymes
584(2)
What happens during enzyme catalysis?
586(2)
Allosteric control
588(1)
Why do enzymes face limitations by being proteins?
589(3)
16.6 Enzyme kinetics
592(8)
Increasing substrate concentration: the limitation of the enzyme's active site
592(3)
How do we determine the values of KM and Vmax?
595(5)
16.7 Enzyme inhibition
600(10)
Irreversible inhibition
601(1)
Reversible inhibition
601(6)
Maths Tool 5 Measuring the gradient of a curve
607(3)
17 Acids, bases, and buffer solutions: life in an aqueous environment
610(53)
17.1 Acids and bases: making life happen
610(7)
What is the definition of an acid and a base?
611(1)
How do acids and bases behave in aqueous solution?
612(2)
Pairing up acids and bases: the conjugate acid-base pair
614(3)
Water: a split personality
617(1)
17.2 The strength of acids and bases: to what extent does dissociation occur?
617(10)
The tug-of-war between conjugate acid-base pairs: who wins in the battle for hydrogen ions?
620(1)
The acid dissociation constant: To what extent does an acid dissociate?
620(2)
The base dissociation constant: To what extent does a base dissociate?
622(2)
pKa and pKb
624(1)
The pKas of amino acids
625(2)
17.3 Keeping things balanced: the ion product of water
627(3)
How can we make use of the ion product of water?
629(1)
How does the ion product of water link Ka and Kb?
629(1)
17.4 The concentration of acids: the pH scale
630(9)
How do [ H+] and [ OH-] vary with pH?
632(1)
What are the pHs of strong and weak acids?
633(3)
Linking weak acid strength and pH: using the Henderson--Hasselbalch equation
636(3)
17.5 Changing pH: neutralization reactions
639(2)
Neutralization reactions in biological systems
641(1)
17.6 The behaviour of acids and bases in biological systems
641(7)
The effect of acidity and basicity on partitioning between aqueous and hydrophobic systems
642(1)
The effect of pH on the extent of acid dissociation
643(1)
What does the pKa tell us about the extent of acid dissociation?
644(3)
The impart of pH on drug design
647(1)
17.7 Buffer solutions: keeping pH the same
648(15)
How does a buffer solution work?
649(4)
How can we determine the pH of a buffer solution?
653(3)
How do we prepare buffer solutions to a desired pH?
656(5)
Maths Tool 6 How do we solve quadratic equations?
661(1)
Maths Tool 7 How do we work with ratios?
662(1)
18 Chemical analysis: characterizing chemical compounds
663(60)
18.1 What is chemical analysis?
663(2)
How do we separate out what is there?
665(1)
18.2 Solvent extraction
665(4)
18.3 Chromatography
669(6)
Liquid-liquid chromatography
670(3)
Changing the mobile phase: liquid and gas chromatography
673(2)
18.4 Electrophoresis
675(6)
Isoelectric focusing
677(4)
18.5 Centrifugation
681(4)
Types of centrifuge
683(1)
Sample collection from centrifuges
683(2)
18.6 Measuring mass: mass spectrometry
685(11)
How does mass spectrometry work?
685(3)
The mass spectrum: the outcome of mass spectrometry
688(1)
What can mass spectrometry tell us?
689(4)
Tandem mass spectrometry
693(2)
How can we couple separation with identification?
695(1)
18.7 Building up the picture: spectroscopic techniques
696(4)
Spectroscopy: using electromagnetic radiation to study molecules
696(1)
What are we measuring when we use spectroscopy?
697(3)
How do we use spectroscopy to characterize chemical compounds?
700(1)
18.8 Characterizing the hydrocarbon framework: nuclear magnetic resonance spectroscopy
700(8)
13C-NMR
702(3)
1H-NMR
705(1)
How do we use NMR to analyse mixtures?
706(1)
Magnetic resonance imaging
707(1)
18.9 Identifying functional groups using infrared spectroscopy
708(6)
18.10 Identifying functional groups using ultraviolet-visible spectroscopy
714(3)
How does UV-visible light cause molecular excitation?
714(2)
The UV-visible spectrum
716(1)
18.11 Establishing 3D structure: X-ray crystallography
717(6)
How was X-ray crystallography used to determine the structure of DNA?
719(4)
Bibliography 723(3)
Answers to self-check questions 726(9)
Index 735
Jonathan Crowe is a publisher and science writer based in Oxford, UK. A biochemist by background, Jonathan has extensive experience of making science accessible to a broad audience both through his science writing and science editing. As well as writing Chemistry for the Biosciences, he is also a visiting lecturer at City, University of London, and associate lecturer at Bath Spa University.

Tony Bradshaw is a Principal Lecturer in Biochemistry at Oxford Brookes University.