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3 | (9) |
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1.1 Clinical trial: Definition |
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3 | (1) |
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1.2 History of clinical trials |
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4 | (5) |
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1.2.1 The Book of Daniel diet trial |
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4 | (1) |
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5 | (1) |
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1.2.3 Chance observations |
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5 | (1) |
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1.2.4 Smallpox trials of Lady-Mary Wortley-Montagu and Maitland and of Edward Jenner |
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6 | (1) |
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1.2.5 Uncontrolled observations |
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6 | (1) |
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1.2.6 Lind's scurvy trial |
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6 | (1) |
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1.2.7 The advent of placebos and shams as controls |
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7 | (1) |
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7 | (1) |
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1.2.9 Great Britain and Sir Austin Bradford Hill |
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8 | (1) |
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1.2.10 Multicenter trials |
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8 | (1) |
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1.2.11 Kefauver-Harris 1963 amendments to the FDA Cosmetic Act of 1938 |
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9 | (1) |
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1.2.12 Treatment-effects monitoring |
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9 | (1) |
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9 | (1) |
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1.4 Terminology: Conventions and definitions |
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10 | (1) |
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11 | (1) |
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Chapter 2 The language of clinical trials |
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12 | (3) |
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12 | (1) |
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2.2 On the language of relativity |
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12 | (1) |
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13 | (1) |
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2.4 The language of the epidemiologist vs the trialist |
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13 | (1) |
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2.5 Terminology: Recommendations and comments |
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14 | (1) |
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Chapter 3 Types and classes of trials |
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15 | (4) |
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15 | (1) |
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16 | (1) |
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16 | (1) |
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16 | (1) |
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3.5 Single-center and multicenter trials |
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16 | (1) |
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16 | (1) |
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17 | (1) |
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3.8 Big and simple trials |
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17 | (1) |
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3.9 Industry trials versus academic trials |
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18 | (1) |
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Chapter 4 The state and nature of trials |
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19 | (12) |
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19 | (1) |
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4.2 On assessing the state and nature of trials |
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19 | (1) |
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20 | (2) |
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4.4 Gender-specific trials |
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22 | (4) |
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26 | (1) |
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4.6 Registration of trials |
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27 | (2) |
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29 | (1) |
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30 | (1) |
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Chapter 5 The activities of clinical trials |
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31 | (8) |
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34 | (1) |
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5.2 Division of responsibilities |
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34 | (1) |
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5.3 Impediments to performance of activities |
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34 | (2) |
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5.3.1 Conflict of responsibilities |
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34 | (1) |
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5.3.2 Inadequate organization |
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35 | (1) |
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5.3.3 Overlap of activities |
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35 | (1) |
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5.3.4 Inadequate time for planning and implementation |
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35 | (1) |
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36 | (1) |
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5.3.6 Maldistribution of funding |
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36 | (1) |
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5.4 Aids to ensuring orderly transition of activities |
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36 | (3) |
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5.4.1 Phased initiation of recruitment and data intake |
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36 | (1) |
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5.4.2 Ensuring adequate organizational structure |
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36 | (1) |
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5.4.3 Opportunities for design modifications in sponsor-initiated trials |
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36 | (1) |
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5.4.4 Certification as a management tool |
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37 | (1) |
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5.4.5 Realistic timetables |
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37 | (1) |
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5.4.6 Ongoing planning and priority assessment |
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37 | (1) |
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5.4.7 Minimizing overlap of activities |
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37 | (2) |
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Chapter 6 Coordinating and other resource centers in multicenter trials |
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39 | (9) |
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39 | (1) |
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39 | (4) |
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39 | (2) |
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41 | (1) |
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41 | (1) |
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42 | (1) |
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43 | (1) |
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6.2.6 Personnel versus "other expenses" |
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43 | (1) |
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6.3 Study chair and office of the study chair |
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43 | (1) |
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44 | (1) |
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45 | (1) |
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46 | (1) |
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46 | (2) |
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Chapter 7 Multi-study networks |
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48 | (5) |
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48 | (1) |
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49 | (2) |
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7.3 Advantages and disadvantages |
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51 | (1) |
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7.4 Modes of creation and funding |
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51 | (1) |
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7.5 Organizational structures |
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51 | (1) |
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52 | (1) |
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Chapter 8 Ethical principles and imperatives in clinical trials |
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53 | (5) |
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53 | (1) |
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8.2 Medical research codes |
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53 | (1) |
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8.3 Principles of medical ethics in research |
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54 | (1) |
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8.4 The state of clinical equipoise |
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54 | (1) |
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8.5 The ethics of choice of study treatments |
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55 | (1) |
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8.6 The monitoring imperative |
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56 | (1) |
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8.7 The ethics of disclosures for consents and of conflicts of interest |
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57 | (1) |
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Chapter 9 Objectivity versus competency in clinical trials |
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58 | (3) |
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58 | (1) |
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9.2 Objectivity constructs and rules |
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58 | (1) |
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9.3 Ethical limits of imposed objectivity constructs |
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59 | (2) |
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PART 2 DESIGN PRINCIPLES AND PRACTICES |
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61 | (88) |
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Chapter 10 Fundamentals of controlled clinical trials |
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63 | (5) |
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63 | (1) |
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10.2 Choice of the test and control treatments |
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63 | (1) |
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10.3 Principles in the selection of the outcome measure |
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64 | (1) |
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10.4 Principles of establishing comparable treatment groups |
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65 | (1) |
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10.5 Principles of masking and bias control |
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66 | (2) |
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68 | (6) |
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68 | (1) |
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11.2 Absolute versus relative truth and bias |
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69 | (1) |
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11.3 Selection and representation biases |
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69 | (1) |
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11.4 Treatment-related biases |
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70 | (2) |
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11.4.1 Treatment-related selection bias |
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70 | (1) |
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11.4.2 Treatment-related feedback bias |
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70 | (1) |
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11.4.3 Treatment-related observation and followup bias |
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71 | (1) |
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11.4.4 Treatment-related analysis bias |
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72 | (1) |
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72 | (1) |
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11.6 Bias "fix," avoidance, and prevention strategies |
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73 | (1) |
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74 | (5) |
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74 | (1) |
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74 | (1) |
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74 | (1) |
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12.4 Masking philosophy of the trialist |
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75 | (1) |
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12.5 Specificity, training, and surveillance |
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75 | (1) |
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12.6 Separation and isolation of functions |
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76 | (1) |
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76 | (1) |
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76 | (1) |
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77 | (1) |
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12.10 Masked treatment-effects monitoring |
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78 | (1) |
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Chapter 13 Variance control |
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79 | (4) |
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79 | (1) |
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13.2 Variance control via design |
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79 | (2) |
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13.2.1 Sample size, number of study clinics, and followup time |
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79 | (1) |
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13.2.2 Randomization unit |
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80 | (1) |
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13.2.3 Randomization design |
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81 | (1) |
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13.2.4 Person as own control |
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81 | (1) |
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13.3 Control via patient selection |
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81 | (1) |
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13.4 Control via execution |
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81 | (1) |
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13.5 Control via analysis |
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82 | (1) |
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Chapter 14 The study treatments |
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83 | (6) |
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83 | (1) |
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83 | (1) |
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84 | (1) |
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84 | (1) |
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85 | (2) |
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14.6 The treatment protocol |
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87 | (1) |
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87 | (1) |
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88 | (1) |
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Chapter 15 Outcome measures |
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89 | (5) |
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89 | (1) |
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15.2 The primary outcome measure |
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89 | (1) |
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90 | (1) |
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15.4 The outcome measure and censoring |
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90 | (1) |
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15.5 Death versus cause of death as outcome measures |
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90 | (1) |
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15.6 Clinical events versus change measures as outcomes |
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91 | (1) |
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15.7 Secondary outcome measures |
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91 | (1) |
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15.8 Surrogate outcome measures |
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91 | (1) |
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15.9 Composite outcome measures |
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92 | (1) |
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92 | (1) |
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15.11 Treatment compliance measures |
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93 | (1) |
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Chapter 16 Sample size and power estimates |
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94 | (20) |
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16.1 Fixed versus sequential sample size designs |
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95 | (2) |
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16.2 Sample size and power calculations as planning guides |
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97 | (1) |
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16.3 Specifications for sample size calculations |
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97 | (6) |
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16.3.1 Number of treatment groups |
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97 | (1) |
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98 | (1) |
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98 | (1) |
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16.3.4 Alternative treatment hypothesis |
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98 | (1) |
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16.3.5 Detectable treatment difference |
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99 | (1) |
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16.3.5.1 Binary outcome measures |
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99 | (1) |
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16.3.5.2 Continuous outcome measures |
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99 | (1) |
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16.3.5.3 Survival outcome measures |
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99 | (1) |
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100 | (1) |
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16.3.7 Choice of assignment ratio |
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100 | (1) |
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16.3.8 Losses to followup |
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100 | (1) |
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16.3.9 Losses due to treatment noncompliance |
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101 | (1) |
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16.3.10 Treatment lag time |
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102 | (1) |
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16.3.11 Stratification for control of baseline risk factors |
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102 | (1) |
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16.3.12 Degree of type I and II error protection for multiple comparisons |
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102 | (1) |
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16.3.13 Degree of type I and II error protection for multiple looks for safety monitoring |
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102 | (1) |
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16.3.14 Degree of type I and II error protection for multiple outcomes |
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103 | (1) |
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16.4 Sample size formulas |
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103 | (5) |
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16.4.1 Binary outcome measures |
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103 | (1) |
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16.4.1.1 Fisher's exact test |
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103 | (1) |
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16.4.1.2 Chi-square approximation |
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103 | (2) |
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16.4.1.3 Inverse sine transform approximation |
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105 | (1) |
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16.4.1.4 Poisson approximation |
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105 | (1) |
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16.4.2 Continuous outcome measures |
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106 | (1) |
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16.4.2.1 Normal approximation for two independent means |
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106 | (1) |
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16.4.2.2 Normal approximation for mean changes from baseline |
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106 | (1) |
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16.4.3 Survival outcome measures |
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106 | (1) |
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16.4.3.1 Exponential survival model |
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107 | (1) |
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16.4.3.2 Cox proportional hazard model |
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107 | (1) |
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108 | (1) |
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16.5.1 Binary outcome measures |
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108 | (1) |
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16.5.1.1 Fisher's exact test |
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108 | (1) |
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16.5.1.2 Chi-square approximation |
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108 | (1) |
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16.5.1.3 Inverse sine transform approximation |
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108 | (1) |
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16.5.1.4 Poisson approximation |
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108 | (1) |
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16.5.2 Continuous outcome measures |
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108 | (1) |
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16.5.2.1 Normal approximation for comparison of two independent means |
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108 | (1) |
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16.5.2.2 Normal approximation for mean changes from baseline |
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108 | (1) |
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16.5.3 Survival outcome measures |
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109 | (1) |
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16.5.3.1 Exponential survival model |
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109 | (1) |
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16.5.3.2 Cox proportional hazard model |
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109 | (1) |
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109 | (1) |
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16.6 Sample size and power calculation illustrations |
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109 | (3) |
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16.6.1 Illustration 1: Sample size calculation using chi-square and inverse sine transform approximation |
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109 | (1) |
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16.6.2 Illustration 2: Sample size calculation using Poisson approximation |
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110 | (1) |
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16.6.3 Illustration 3: Sample size calculation using Coronary Drug Project design specifications |
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110 | (1) |
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16.6.4 Illustration 4: Sample size calculation for blood pressure change |
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110 | (1) |
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16.6.5 Illustration 5: Sample size calculation using Fisher's exact test |
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111 | (1) |
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16.6.6 Illustration 6: Power calculation based on chi-square and inverse sine transform approximation |
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111 | (1) |
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16.6.7 Illustration 7: Power for design specifications given in Illustration 2 for 1,500 patients per treatment group |
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111 | (1) |
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16.6.8 Illustration 8: Power for design specifications given in Illustration 4 for 150 patients per treatment group |
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112 | (1) |
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16.6.9 Illustration 9: Sample size calculation using an exponential survival model with Lachin generalization |
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112 | (1) |
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16.7 Posterior sample size and power assessments |
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112 | (1) |
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16.8 Software for sample size and power calculations |
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112 | (2) |
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114 | (14) |
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114 | (1) |
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17.2 Adaptive randomization |
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115 | (1) |
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116 | (4) |
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116 | (1) |
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117 | (2) |
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119 | (1) |
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17.4 Construction of the randomization schedule |
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120 | (4) |
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17.5 Documentation of the randomization scheme |
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124 | (1) |
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17.6 Administration of the randomization process |
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124 | (4) |
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Chapter 18 Treatment masking |
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128 | (7) |
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128 | (1) |
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128 | (1) |
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18.3 Placebo and sham treatments |
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129 | (1) |
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18.4 Mechanics of treatment masking |
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129 | (2) |
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18.5 Bin-numbering versus medication-numbering systems for treatment masking |
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131 | (1) |
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18.6 Labeling and packaging of masked product |
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131 | (1) |
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18.7 Shipping and supply of masked drug |
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132 | (1) |
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18.8 Maintenance of the treatment mask |
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133 | (1) |
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133 | (1) |
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18.10 On reporting masking procedures |
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133 | (1) |
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18.11 On misconceptions about masking |
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134 | (1) |
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Chapter 19 The study plan |
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135 | (5) |
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135 | (1) |
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19.2 Objective and specific aims |
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135 | (1) |
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19.3 The treatment design |
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136 | (1) |
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19.4 Composition of the study population |
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137 | (1) |
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19.5 The plan for patient enrollment and followup |
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138 | (1) |
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19.6 The plan for close-out of followup |
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139 | (1) |
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Chapter 20 Data collection considerations |
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140 | (9) |
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140 | (1) |
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20.2 Data collection principles |
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140 | (1) |
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20.3 Data map and collection schedule |
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141 | (2) |
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20.4 Factors influencing the clinic visit schedule |
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143 | (1) |
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143 | (1) |
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20.4.2 Screening and baseline visits |
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143 | (1) |
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20.4.3 Followup clinic visit schedule |
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143 | (1) |
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144 | (1) |
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20.5 Data requirements by type of visit |
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144 | (3) |
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146 | (1) |
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20.5.2 Data needed at followup visits |
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146 | (1) |
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20.6 Data system considerations |
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147 | (2) |
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20.6.1 Paper versus electronic data forms |
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147 | (1) |
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20.6.2 Distributed data entry versus centralized data entry |
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148 | (1) |
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20.6.3 Data-harvesting considerations |
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148 | (1) |
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20.6.4 Centralized versus distributed databases |
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148 | (1) |
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149 | (72) |
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Chapter 21 Data collection forms |
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151 | (13) |
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151 | (1) |
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21.2 Form layout and production |
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152 | (4) |
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152 | (1) |
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21.2.2 Paper size and weight |
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152 | (1) |
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21.2.3 Print font and form reproduction |
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152 | (1) |
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21.2.4 Location of instructional material |
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152 | (1) |
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153 | (1) |
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21.2.6 Form reproduction and assembly |
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153 | (1) |
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21.2.7 Arrangement of items on forms |
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154 | (1) |
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154 | (1) |
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21.2.8.1 Items designed for unformatted written, replies |
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154 | (1) |
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21.2.8.2 Items requiring formatted written replies |
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154 | (1) |
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21.2.8.3 Items answered by check marks |
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155 | (1) |
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21.2.9 Location of form and patient identifiers |
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155 | (1) |
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21.2.10 Format considerations for data entry |
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155 | (1) |
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21.3 Considerations affecting item construction |
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156 | (1) |
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21.3.1 Explicit versus implicit item forms |
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156 | (1) |
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21.3.2 Interviewer-completed versus patient-completed items |
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156 | (1) |
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21.3.3 Questioning strategy |
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156 | (1) |
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21.3.4 Single- versus multiple-use forms |
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156 | (1) |
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157 | (5) |
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157 | (1) |
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21.4.2 Language and terminology |
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157 | (1) |
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21.4.3 Items from other studies |
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158 | (1) |
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21.4.4 Closed-versus open-form items |
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158 | (1) |
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21.4.5 Response checklists |
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158 | (1) |
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21.4.6 "Unknown," "don't know," and "uncertain" as response options |
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159 | (1) |
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21.4.7 Measurement and calculation items |
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159 | (1) |
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160 | (1) |
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21.4.9 Time and date items |
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160 | (1) |
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21.4.10 Birthdate and age items |
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160 | (1) |
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21.4.11 Identifying items |
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161 | (1) |
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161 | (1) |
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21.4.13 Reminder and documentation items |
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161 | (1) |
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21.4.14 Data format glitches |
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162 | (1) |
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21.5 Updates and revisions of study forms |
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162 | (1) |
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162 | (1) |
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21.7 Types of study forms |
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163 | (1) |
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Chapter 22 Start-up and maintenance procedures |
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164 | (13) |
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164 | (1) |
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22.2 The study name and nickname/acronym |
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164 | (2) |
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166 | (3) |
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166 | (1) |
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22.3.2 Study handbook and manual of operations |
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167 | (1) |
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22.3.3 Data collection forms |
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167 | (1) |
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22.3.4 Consent and recruitment documents |
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167 | (1) |
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22.3.5 Investigator's brochure |
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167 | (2) |
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22.4 Training and certification |
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169 | (1) |
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22.5 The start-up checklist |
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169 | (3) |
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22.6 Shakedown procedures |
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172 | (1) |
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22.7 Maintenance procedures checklist |
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173 | (4) |
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Chapter 23 Participant recruitment and enrollment |
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177 | (9) |
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177 | (1) |
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23.2 Methods of patient recruitment |
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177 | (2) |
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179 | (1) |
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23.4 The patient shakedown process |
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179 | (1) |
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23.5 The ethics of recruitment |
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179 | (1) |
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180 | (4) |
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23.6.1 General guidelines |
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180 | (1) |
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23.6.2 The consent process |
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180 | (3) |
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23.6.3 Documentation of the consent |
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183 | (1) |
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23.6.4 What constitutes an informed consent? |
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183 | (1) |
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23.6.5 Maintenance of consents |
|
|
184 | (1) |
|
|
184 | (1) |
|
23.8 Randomization and initiation of treatment |
|
|
185 | (1) |
|
Chapter 24 Patient followup, close-out, and post-trial followup |
|
|
186 | (9) |
|
|
186 | (1) |
|
24.2 The treatment and followup schedules |
|
|
186 | (1) |
|
24.3 Maintenance of investigator interest and commitment |
|
|
187 | (1) |
|
24.4 Maintenance of participant interest |
|
|
188 | (1) |
|
24.5 The battle for adherence to treatment |
|
|
188 | (1) |
|
24.6 Treatment compliance |
|
|
189 | (1) |
|
|
189 | (2) |
|
24.8 Close-out of patient followup |
|
|
191 | (2) |
|
|
193 | (1) |
|
24.10 Post-trial followup |
|
|
193 | (2) |
|
Chapter 25 Midcourse changes and coping strategies |
|
|
195 | (10) |
|
|
195 | (1) |
|
25.2 Changes to the study protocol |
|
|
195 | (1) |
|
25.3 Changes in entry criteria |
|
|
196 | (1) |
|
|
197 | (1) |
|
25.5 Addition of new test procedures and changes to existing test procedures |
|
|
198 | (1) |
|
25.6 Additional data collection forms |
|
|
198 | (1) |
|
25.7 Changes to existing data forms |
|
|
198 | (1) |
|
25.8 Numbered policy and procedures memoranda |
|
|
199 | (1) |
|
25.9 Addition of study clinics |
|
|
200 | (1) |
|
25.10 Departures of study clinics |
|
|
200 | (1) |
|
|
200 | (1) |
|
25.12 Midcourse addition or change of coordinating center |
|
|
200 | (1) |
|
25.12.1 Adding a coordinating center |
|
|
200 | (1) |
|
25.12.2 Relocation of a coordinating center |
|
|
200 | (1) |
|
25.12.3 Change of coordinating center |
|
|
201 | (1) |
|
25.13 Change of suppliers and service providers |
|
|
201 | (1) |
|
|
201 | (1) |
|
25.15 Consents, reconsents, updates, and deconsents |
|
|
201 | (1) |
|
25.16 Clinical holds, early stops, and shutdowns |
|
|
202 | (1) |
|
|
203 | (1) |
|
|
203 | (1) |
|
|
203 | (1) |
|
|
203 | (2) |
|
|
203 | (1) |
|
25.17.2 Changes in regulations or requirements and guidelines |
|
|
204 | (1) |
|
25.17.3 Changes in study governance or leadership |
|
|
204 | (1) |
|
Chapter 26 Adverse events (AEs) |
|
|
205 | (5) |
|
|
205 | (1) |
|
26.2 Data collection and AEs |
|
|
205 | (1) |
|
26.3 FDA IND safety reports |
|
|
206 | (1) |
|
26.4 Dissemination of safety reports to IRBs |
|
|
206 | (1) |
|
26.5 AEs and consent forms |
|
|
207 | (1) |
|
26.6 Treatment-effects monitoring committees and AEs |
|
|
207 | (1) |
|
26.7 On the shortcomings of trials for detection of AEs |
|
|
207 | (2) |
|
26.8 On off-label use and AEs |
|
|
209 | (1) |
|
Chapter 27 Quality assurance |
|
|
210 | (11) |
|
|
210 | (1) |
|
|
211 | (2) |
|
|
213 | (1) |
|
27.4 Replication as a quality-assurance measure |
|
|
213 | (1) |
|
|
214 | (1) |
|
27.6 Monitoring for secular trends |
|
|
215 | (1) |
|
27.7 Data integrity-assurance procedures |
|
|
216 | (1) |
|
27.8 Performance monitoring |
|
|
216 | (1) |
|
|
217 | (1) |
|
27.10 Quality-control committees and centers |
|
|
218 | (1) |
|
|
219 | (2) |
|
|
221 | (72) |
|
Chapter 28 Basic data analysis and counting principles for primary-results publications |
|
|
223 | (5) |
|
|
223 | (1) |
|
28.2 The primary data analysis principle and counting rules |
|
|
223 | (2) |
|
28.3 Intention to treat (ITT)/analysis by assigned treatment |
|
|
225 | (1) |
|
28.4 Analysis by administered treatment/per protocol analysis (PPA) |
|
|
225 | (1) |
|
28.5 Analysis by treatment assigned versus treatment received |
|
|
226 | (1) |
|
28.6 The order principle of analyses |
|
|
226 | (1) |
|
28.7 The principle of parsimony |
|
|
226 | (1) |
|
|
227 | (1) |
|
28.9 Analysis do's and don'ts |
|
|
227 | (1) |
|
Chapter 29 Study datasets |
|
|
228 | (8) |
|
|
228 | (1) |
|
29.2 Development and maintenance of the data system |
|
|
228 | (1) |
|
29.3 Data security precautions and protections |
|
|
228 | (1) |
|
29.4 Data breach protections |
|
|
229 | (1) |
|
|
230 | (2) |
|
29.5.1 NIH record retention and access policy |
|
|
231 | (1) |
|
29.6 The study database and analysis datasets |
|
|
232 | (1) |
|
29.7 Data harvests and freezes |
|
|
232 | (1) |
|
29.8 Shared and distributed datasets |
|
|
233 | (1) |
|
29.9 The final analysis database |
|
|
233 | (1) |
|
29.10 Data sharing and public-use datasets |
|
|
234 | (2) |
|
Chapter 30 Basic data analysis procedures |
|
|
236 | (12) |
|
30.1 Basic analysis requirements |
|
|
236 | (1) |
|
30.2 Basic analytic methods |
|
|
237 | (4) |
|
30.2.1 Comparisons of proportions |
|
|
237 | (1) |
|
30.2.2 Lifetable (survival) analyses |
|
|
238 | (1) |
|
30.2.3 Other descriptive methods |
|
|
239 | (2) |
|
30.3 Adjustment procedures |
|
|
241 | (3) |
|
|
241 | (2) |
|
30.3.2 Multiple regression |
|
|
243 | (1) |
|
30.3.2.1 Linear multiple-regression model |
|
|
243 | (1) |
|
30.3.2.2 Logistic multiple-regression model |
|
|
244 | (1) |
|
30.4 Basic checking routines |
|
|
244 | (1) |
|
|
244 | (1) |
|
|
245 | (1) |
|
|
245 | (1) |
|
|
245 | (1) |
|
30.4.5 Destructive data analysis |
|
|
245 | (1) |
|
30.5 Questionable practices for publication quality analyses |
|
|
245 | (3) |
|
30.5.1 Mixed freeze dates |
|
|
245 | (1) |
|
30.5.2 Use of "dirty" data |
|
|
246 | (1) |
|
|
246 | (1) |
|
30.5.4 Overreliance on p-values |
|
|
246 | (1) |
|
|
246 | (2) |
|
Chapter 31 Questions concerning the design, analysis, and interpretation of clinical trials |
|
|
248 | (14) |
|
|
248 | (1) |
|
|
248 | (4) |
|
31.3 Study population questions |
|
|
252 | (1) |
|
31.4 Randomization questions |
|
|
253 | (1) |
|
|
254 | (2) |
|
|
256 | (1) |
|
31.7 Treatment administration questions |
|
|
256 | (1) |
|
31.8 Patient followup questions |
|
|
257 | (1) |
|
31.9 Outcome measure questions |
|
|
258 | (1) |
|
31.10 Data integrity questions |
|
|
258 | (1) |
|
31.11 Data analysis questions |
|
|
259 | (2) |
|
31.12 Conclusion questions |
|
|
261 | (1) |
|
Chapter 32 Treatment-effects monitoring |
|
|
262 | (12) |
|
|
262 | (1) |
|
|
262 | (1) |
|
32.3 The monitoring imperative |
|
|
263 | (1) |
|
32.4 Trials requiring monitoring |
|
|
264 | (1) |
|
32.5 Requirements for adequate monitoring |
|
|
265 | (1) |
|
|
265 | (1) |
|
32.7 Objectivity constructs |
|
|
265 | (3) |
|
|
266 | (1) |
|
|
266 | (1) |
|
32.7.3 Stopping rules and monitoring bounds |
|
|
267 | (1) |
|
|
268 | (1) |
|
32.9 The monitoring report |
|
|
269 | (3) |
|
32.10 Communication linkage |
|
|
272 | (1) |
|
32.11 Dealing with stop recommendations |
|
|
272 | (2) |
|
Chapter 33 Issues in treatment-effects monitoring |
|
|
274 | (14) |
|
|
274 | (1) |
|
|
274 | (5) |
|
33.3 Procedural and operational issues |
|
|
279 | (6) |
|
|
285 | (3) |
|
Chapter 34 Subgroup analyses |
|
|
288 | (5) |
|
|
288 | (1) |
|
34.2 The subgrouping variable |
|
|
288 | (1) |
|
34.3 Features of proper subgroup analyses |
|
|
289 | (1) |
|
34.4 A priori versus post hoc subgroup analyses |
|
|
290 | (1) |
|
34.5 Mandated subgroup analyses |
|
|
290 | (1) |
|
34.6 Reporting subgroup differences |
|
|
290 | (1) |
|
34.7 Finding subgroup differences in published reports |
|
|
291 | (1) |
|
34.8 Interpretation and reproducibility of subgroup finding |
|
|
292 | (1) |
|
PART 5 ORGANIZATION AND MANAGEMENT |
|
|
293 | (52) |
|
|
295 | (12) |
|
|
295 | (1) |
|
35.2 "Do I really want to do this study?" |
|
|
296 | (1) |
|
|
296 | (4) |
|
35.3.1 Sponsor-initiated versus investigator-initiated trials |
|
|
296 | (1) |
|
35.3.2 Investigator-initiated versus sponsor-initiated funding request |
|
|
297 | (1) |
|
35.3.3 Number of tries at funding |
|
|
297 | (1) |
|
35.3.4 Permission to apply for funding |
|
|
297 | (1) |
|
35.3.5 Acceptance for review |
|
|
297 | (1) |
|
35.3.6 Fixed versus cost reimbursement |
|
|
298 | (1) |
|
35.3.7 Effort versus funding |
|
|
298 | (1) |
|
35.3.8 Fixed versus unit payment modes of funding study clinics |
|
|
298 | (1) |
|
35.3.9 Direct versus indirect costs |
|
|
298 | (1) |
|
35.3.10 Direct versus indirect distribution of funds to study centers |
|
|
299 | (1) |
|
35.3.11 Patient care costs |
|
|
300 | (1) |
|
35.3.12 Study liability insurance |
|
|
300 | (1) |
|
|
300 | (1) |
|
35.4.1 Deadlines and review process |
|
|
300 | (1) |
|
35.4.2 Factors to consider when deciding whether to respond |
|
|
300 | (1) |
|
|
301 | (1) |
|
|
301 | (4) |
|
35.5.1 Horseback budget estimates |
|
|
302 | (1) |
|
|
302 | (2) |
|
35.5.3 Budget justification |
|
|
304 | (1) |
|
35.5.4 Budget summaries and analyses |
|
|
305 | (1) |
|
35.6 Preparation and submission of the funding proposal |
|
|
305 | (1) |
|
35.7 Negotiations and award |
|
|
306 | (1) |
|
|
306 | (1) |
|
35.9 The unit cost of trials |
|
|
306 | (1) |
|
Chapter 36 Organizational design and structure |
|
|
307 | (7) |
|
|
307 | (1) |
|
36.2 Symptoms of organizational problems |
|
|
307 | (1) |
|
36.3 Organizing questions |
|
|
308 | (1) |
|
36.4 Delineation of functions and responsibilities |
|
|
308 | (1) |
|
36.5 Separation of roles and functions |
|
|
309 | (1) |
|
36.6 Linkages and interactions of organizational bodies |
|
|
310 | (1) |
|
36.7 Due process considerations |
|
|
310 | (1) |
|
36.8 Communications structures |
|
|
311 | (1) |
|
36.9 Other structural and organizational issues |
|
|
311 | (3) |
|
36.9.1 Disclosure requirements for conflicts of interest |
|
|
311 | (1) |
|
36.9.2 Pay for voting members of the treatment-effects monitoring and advisory-review committees |
|
|
312 | (1) |
|
36.9.3 Review and approval of proposed ancillary studies |
|
|
312 | (1) |
|
36.9.4 Publication and internal editorial review procedures |
|
|
313 | (1) |
|
36.9.5 Publicity and information access policy issues |
|
|
313 | (1) |
|
Chapter 37 Study governance |
|
|
314 | (10) |
|
|
314 | (1) |
|
37.2 Principal investigator |
|
|
314 | (1) |
|
|
315 | (2) |
|
|
317 | (1) |
|
|
318 | (1) |
|
|
318 | (3) |
|
37.7 Steering committee subcommittees |
|
|
321 | (1) |
|
|
321 | (1) |
|
37.9 Treatment-effects monitoring and advisory-review committee |
|
|
322 | (2) |
|
Chapter 38 Study organizational structures and meetings |
|
|
324 | (9) |
|
|
324 | (1) |
|
|
324 | (1) |
|
38.3 Parliamentary procedures |
|
|
325 | (2) |
|
38.4 Committee creation and specifications |
|
|
327 | (1) |
|
38.5 Meeting agendas and materials |
|
|
328 | (1) |
|
38.6 Meeting logistics and arrangements |
|
|
328 | (2) |
|
|
330 | (1) |
|
|
330 | (3) |
|
38.8.1 Steering committee |
|
|
330 | (1) |
|
38.8.2 Executive committee/study officers |
|
|
331 | (1) |
|
38.8.3 Treatment-effects monitoring committee |
|
|
331 | (1) |
|
|
332 | (1) |
|
Chapter 39 Regulations, requirements, policies, and guidelines |
|
|
333 | (12) |
|
|
333 | (1) |
|
39.2 IRB review requirements |
|
|
334 | (1) |
|
39.3 Investigator IRB training and certification |
|
|
335 | (1) |
|
39.4 FDA regulations, requirements, and rules |
|
|
336 | (1) |
|
39.5 Registration requirement |
|
|
336 | (1) |
|
39.6 Data-sharing requirements |
|
|
337 | (1) |
|
39.7 Authorship requirements |
|
|
337 | (1) |
|
39.8 Manuscript deposit requirement |
|
|
337 | (1) |
|
39.9 Conflict-of-interest disclosure requirements |
|
|
338 | (2) |
|
39.10 NIH guidelines on inclusion of women, pregnant women, children, and ethnic minorities |
|
|
340 | (1) |
|
39.11 NIH guidelines on treatment-effects monitoring |
|
|
341 | (1) |
|
39.12 Other regulations, requirements, policies, and rules |
|
|
341 | (3) |
|
39.12.1 Effort certification |
|
|
341 | (1) |
|
39.12.2 Office of Management and Budget (OMB) clearance of data collection forms |
|
|
342 | (1) |
|
39.12.3 Health Insurance Portability and Accountability (HIPAA) training |
|
|
342 | (1) |
|
39.12.4 Summary reports of adverse events to IRBs of trials with treatment-effects monitoring committees |
|
|
343 | (1) |
|
39.12.5 The CONSORT guideline |
|
|
343 | (1) |
|
|
344 | (1) |
|
39.13.1 Gender by treatment subgroup analysis in publications of trials |
|
|
344 | (1) |
|
39.13.2 Requirement for systematic review as prelude to IRB approval of proposed trials |
|
|
344 | (1) |
|
|
345 | (40) |
|
Chapter 40 The publication imperative |
|
|
347 | (3) |
|
|
347 | (1) |
|
40.2 The publication imperative |
|
|
347 | (1) |
|
40.3 The realities of meeting the publication imperative |
|
|
348 | (1) |
|
|
349 | (1) |
|
|
349 | (1) |
|
Chapter 41 Presentation, publication, information, and data access policies |
|
|
350 | (11) |
|
|
350 | (1) |
|
41.2 Information constraints during conduct |
|
|
350 | (1) |
|
41.3 Publication questions |
|
|
350 | (3) |
|
41.3.1 When to publish results? |
|
|
350 | (1) |
|
41.3.2 Presentation or publication? |
|
|
351 | (1) |
|
|
352 | (1) |
|
|
353 | (1) |
|
41.3.5 Journal supplements versus regular Issues |
|
|
353 | (1) |
|
41.4 Authorship and internal review procedures |
|
|
353 | (4) |
|
41.4.1 Individual versus corporate authorship attribution |
|
|
354 | (1) |
|
41.4.2 Who to list as authors? |
|
|
355 | (1) |
|
41.4.3 Writing responsibilities |
|
|
356 | (1) |
|
|
356 | (1) |
|
41.4.5 Internal review procedures |
|
|
357 | (1) |
|
41.5 Information access policy issues |
|
|
357 | (4) |
|
41.5.1 Password-protected and public study web sites |
|
|
357 | (1) |
|
41.5.2 Access to meeting minutes |
|
|
358 | (1) |
|
41.5.3 Access to study data |
|
|
358 | (1) |
|
41.5.4 Access to study forms and manuals |
|
|
359 | (1) |
|
41.5.5 Inquiries from the press |
|
|
359 | (1) |
|
41.5.6 Special analyses in response to criticisms |
|
|
359 | (1) |
|
|
360 | (1) |
|
Chapter 42 Preparation of study publications |
|
|
361 | (8) |
|
|
361 | (1) |
|
|
361 | (1) |
|
|
361 | (1) |
|
|
362 | (5) |
|
|
362 | (1) |
|
42.4.2 Authorship attribution |
|
|
362 | (1) |
|
|
362 | (1) |
|
|
362 | (4) |
|
|
366 | (1) |
|
|
366 | (1) |
|
|
366 | (1) |
|
|
366 | (1) |
|
|
366 | (1) |
|
42.4.10 Credits and acknowledgments |
|
|
366 | (1) |
|
|
367 | (1) |
|
42.5 Internal review and submission |
|
|
367 | (1) |
|
42.6 Electronic submissions |
|
|
367 | (1) |
|
42.7 Acceptance and publication |
|
|
368 | (1) |
|
Chapter 43 Document and report production |
|
|
369 | (9) |
|
|
369 | (1) |
|
|
369 | (1) |
|
|
369 | (1) |
|
43.4 Format-robust electronic files |
|
|
370 | (1) |
|
|
370 | (2) |
|
43.6 Format and code specifications |
|
|
372 | (3) |
|
|
375 | (1) |
|
|
376 | (1) |
|
|
376 | (1) |
|
43.10 Maintenance and updates |
|
|
377 | (1) |
|
43.11 Storage and archiving |
|
|
377 | (1) |
|
Chapter 44 Reading reports of trials |
|
|
378 | (7) |
|
|
378 | (1) |
|
44.2 Finding relevant publications |
|
|
378 | (1) |
|
44.3 Reading order in results papers |
|
|
379 | (1) |
|
44.4 Questions and factors to consider when reading |
|
|
380 | (3) |
|
44.5 Valid and invalid criticisms |
|
|
383 | (1) |
|
44.6 Desirable characteristics of a critic |
|
|
383 | (2) |
|
|
385 | (56) |
|
Chapter 45 Scientific integrity |
|
|
387 | (8) |
|
|
387 | (1) |
|
|
387 | (1) |
|
45.3 Office of Research Integrity and Office of Regulatory Affairs |
|
|
388 | (1) |
|
45.4 Research misconduct and consequences |
|
|
389 | (1) |
|
45.5 Reporting and disposition of suspected cases of misconduct |
|
|
390 | (1) |
|
45.6 Practices conducive to inducing data fraud |
|
|
391 | (1) |
|
|
391 | (1) |
|
45.6.2 Threats of funding cuts because of performance |
|
|
391 | (1) |
|
45.6.3 Ranking performance |
|
|
392 | (1) |
|
|
392 | (1) |
|
45.6.5 Harassment by the data center |
|
|
392 | (1) |
|
45.7 When is data fraud data fraud? |
|
|
392 | (1) |
|
45.8 Findings of data fraud and data purges |
|
|
392 | (1) |
|
45.9 Data fraud detection and prevention practices |
|
|
393 | (2) |
|
|
393 | (1) |
|
|
393 | (1) |
|
|
393 | (1) |
|
|
393 | (1) |
|
45.9.5 Integrity discussions |
|
|
393 | (1) |
|
|
393 | (1) |
|
|
393 | (1) |
|
|
394 | (1) |
|
Chapter 46 Transgressions of trialists |
|
|
395 | (4) |
|
|
395 | (1) |
|
46.2 Design transgressions |
|
|
395 | (1) |
|
46.3 Enrollment transgressions |
|
|
396 | (1) |
|
46.4 Execution transgressions |
|
|
397 | (1) |
|
46.5 Analysis transgressions |
|
|
397 | (1) |
|
46.6 Publication transgressions |
|
|
398 | (1) |
|
Chapter 47 Homogeneity versus heterogeneity in trials |
|
|
399 | (5) |
|
|
399 | (1) |
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47.2 The homogeneity mindset of the trialist |
|
|
399 | (1) |
|
47.3 On reasons to select and exclude in trials |
|
|
399 | (1) |
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47.4 On selection for variance control |
|
|
400 | (1) |
|
47.5 The cost of selectivity |
|
|
401 | (1) |
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47.6 On the use of age, gender, and ethnic group for selection |
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|
401 | (2) |
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402 | (1) |
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|
402 | (1) |
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402 | (1) |
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47.7 On reasons to favor heterogeneity over homogeneity |
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|
403 | (1) |
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|
404 | (4) |
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|
404 | (1) |
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48.2 Meta-analyses and systematic reviews |
|
|
404 | (1) |
|
|
405 | (1) |
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48.4 Finding meta-analyses and systematic reviews |
|
|
405 | (1) |
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48.5 Systematic reviews as preludes to trials |
|
|
406 | (1) |
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48.6 Real-time meta-analyses |
|
|
406 | (1) |
|
|
407 | (1) |
|
Chapter 49 The University Group Diabetes Program (UGDP) |
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|
408 | (16) |
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|
408 | (1) |
|
|
409 | (1) |
|
49.3 History and criticisms |
|
|
409 | (5) |
|
49.4 The tolbutamide mortality results |
|
|
414 | (2) |
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49.5 The phenformin mortality results |
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416 | (1) |
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|
416 | (1) |
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49.7 Conclusion and discussion |
|
|
417 | (2) |
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419 | (5) |
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419 | (1) |
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420 | (1) |
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49.8.3 Seek and ye shall find? |
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|
420 | (1) |
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49.8.4 Who said you can vote? |
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|
420 | (1) |
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49.8.5 What do you mean, "The visit is missed"? |
|
|
421 | (1) |
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49.8.6 Let's have our cake and eat it too! |
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|
421 | (1) |
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49.8.7 The heat in the kitchen |
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421 | (1) |
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421 | (1) |
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49.8.9 The "miracle" treatment |
|
|
422 | (1) |
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49.8.10 Mortality: The unspecified outcome |
|
|
422 | (1) |
|
49.8.11 The randomization recipe |
|
|
422 | (1) |
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49.8.12 The best two out of three votes |
|
|
422 | (1) |
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49.8.13 Treatment-effects-monitoring |
|
|
423 | (1) |
|
Chapter 50 Training trialists |
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424 | (4) |
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|
424 | (1) |
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50.2 The clinical researcher versus the trialist |
|
|
424 | (1) |
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|
424 | (1) |
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50.4 The academic trialist |
|
|
425 | (1) |
|
50.5 The NIH and the CTSA |
|
|
425 | (2) |
|
50.6 Short courses and certificate programs |
|
|
427 | (1) |
|
50.7 Training the research team |
|
|
427 | (1) |
|
50.8 Educating the public about trials |
|
|
427 | (1) |
|
Chapter 51 Comparative effectiveness research (CER) and clinical trials |
|
|
428 | (4) |
|
|
428 | (1) |
|
|
428 | (1) |
|
|
429 | (1) |
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51.4 Efficacy versus pragmatic trials and CER |
|
|
429 | (1) |
|
51.5 Observational studies versus randomized trials and CER |
|
|
430 | (1) |
|
|
431 | (1) |
|
Chapter 52 Readings and reference materials |
|
|
432 | (9) |
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|
432 | (1) |
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|
432 | (2) |
|
52.3 Dictionaries, manuals, and encyclopedias |
|
|
434 | (1) |
|
52.4 Codes and guidelines |
|
|
435 | (1) |
|
|
436 | (1) |
|
|
437 | (1) |
|
52.7 A reading list of a different kind |
|
|
437 | (4) |
|
|
441 | (158) |
|
Appendix A Glossary of definitions |
|
|
443 | (15) |
|
Appendix B Terminology usage and recommendations |
|
|
458 | (4) |
|
Appendix C Medical research codes of ethics |
|
|
462 | (4) |
|
|
462 | (1) |
|
C.2 Declaration of Helsinki (Year 2000 version) |
|
|
463 | (3) |
|
Appendix D Teaching questions and answers |
|
|
466 | (7) |
|
Appendix E Aids for trialists |
|
|
473 | (10) |
|
E.1 The "Mother Test" for trialists |
|
|
473 | (3) |
|
E.2 The Treatment-Effects Monitoring Manifesto for Multicenter Randomized Trials |
|
|
476 | (1) |
|
E.3 Knowledge Assessment Quiz for Clinic Personnel Starting a Trial |
|
|
477 | (5) |
|
E.4 Integrity Assurance Form (Johns Hopkins University Center for Clinical Trials) |
|
|
482 | (1) |
|
Appendix F Data items and forms illustrations |
|
|
483 | (38) |
|
|
483 | (1) |
|
F.2 Items that indicate presence or absence of a finding or condition |
|
|
484 | (2) |
|
|
486 | (1) |
|
|
487 | (1) |
|
|
487 | (2) |
|
F.6 Comparative evaluations |
|
|
489 | (1) |
|
F.7 Inverted meaning of a "yes" reply |
|
|
490 | (1) |
|
F.8 Presence versus absence of a condition |
|
|
490 | (1) |
|
|
490 | (2) |
|
F.10 Direction of response |
|
|
492 | (1) |
|
|
493 | (1) |
|
F.12 Vertical versus horizontal response lists |
|
|
494 | (2) |
|
|
496 | (2) |
|
F.14 Precision specifications |
|
|
498 | (1) |
|
|
499 | (3) |
|
|
502 | (1) |
|
F.17 Age and birthdate items |
|
|
503 | (1) |
|
F.18 Reminder and documentation items |
|
|
504 | (1) |
|
F.19 Full-page versus two-column layout |
|
|
505 | (4) |
|
F.20 Layout for skip items |
|
|
509 | (3) |
|
F.21 Instructional information |
|
|
512 | (1) |
|
F.22 Unformatted responses |
|
|
513 | (1) |
|
|
514 | (1) |
|
F.24 Layout for check positions |
|
|
515 | (3) |
|
F.25 Field designations and precoded responses |
|
|
518 | (3) |
|
Appendix G Randomization illustrations |
|
|
521 | (8) |
|
G.1 Illustration 1: Restricted randomization using a table of random permutation |
|
|
521 | (1) |
|
G.2 Illustration 2: Unblocked assignments using a table of random numbers |
|
|
521 | (2) |
|
G.3 Illustration 3: Blocked assignments using the Moses-Oakford algorithm and a table of random numbers |
|
|
523 | (1) |
|
G.4 Illustration 4: Stratified and blocked assignments using the Moses-Oakford algorithm and a table of random numbers |
|
|
523 | (2) |
|
G.5 Illustration 5: Sample assignment schedule for the Macular Photocoagulation Study |
|
|
525 | (1) |
|
G.6 Illustration 6: Double-masked assignment schedule using the Moses-Oakford algorithm and a table of random numbers |
|
|
526 | (1) |
|
G.7 Illustration 7: Sample CDP double-masked assignment schedule |
|
|
527 | (2) |
|
Appendix H Activities by stage of trial |
|
|
529 | (9) |
|
|
529 | (1) |
|
|
530 | (1) |
|
H.III Protocol development |
|
|
530 | (2) |
|
|
532 | (1) |
|
H.V Treatment and followup |
|
|
533 | (2) |
|
|
535 | (1) |
|
|
536 | (1) |
|
H.VIII Post-trial followup (optional) |
|
|
537 | (1) |
|
Appendix I Sketches of trials: Year 2006 publications in N Engl J Med, JAMA, BMJ, and Lancet |
|
|
538 | (21) |
|
Table I.1 Clinical trials published in 2006 in N Engl J Med, JAMA, BMJ, or Lancet, indexed by PubMed publication type |
|
|
538 | (1) |
|
Table I.2 PubMed indexing by gender, age, phase, and sponsorship |
|
|
539 | (1) |
|
Table I.3 Registration record |
|
|
539 | (1) |
|
Table I.4 Reason for publication, authorship format, and number of authors |
|
|
539 | (2) |
|
Table I.5 Location of study sites |
|
|
541 | (1) |
|
Table I.6 Primary outcome measures and conclusions |
|
|
541 | (1) |
|
Table I.7 Number of treatment groups and sample size |
|
|
541 | (1) |
|
Table I.8 Number of centers in multicenter trials |
|
|
542 | (1) |
|
Table I.9 Design type and unit of randomization |
|
|
542 | (5) |
|
Table I.10 Enrollment and followup periods |
|
|
547 | (1) |
|
|
547 | (1) |
|
Table I.12 Treatment-effects monitoring |
|
|
547 | (1) |
|
Table I.13 Aim, purpose, and modalities tested |
|
|
547 | (4) |
|
Table I.14 Other features |
|
|
551 | (2) |
|
Trial sketch data collection form |
|
|
553 | (5) |
|
Registration data collection form |
|
|
558 | (1) |
|
Appendix J Sample study documents |
|
|
559 | (32) |
|
1 Alzheimer's Disease Anti-inflammatory Prevention Trial (ADAPT) Study Design Synopsis |
|
|
560 | (3) |
|
2 ADAPT CV table of contents |
|
|
563 | (1) |
|
3 ADAPT Policy and Procedures Memoranda (PPM); through February 8, 2006 |
|
|
564 | (3) |
|
4 ADAPT Protocol table of contents (version 1.4; November 19, 2002) |
|
|
567 | (2) |
|
5 ADAPT Handbook table of contents (Version 1.1; May 1, 2001) |
|
|
569 | (3) |
|
6 ADAPT forms list (as of August 2007) |
|
|
572 | (1) |
|
|
573 | (6) |
|
8 ADAPT IPPMs 1 through 3 |
|
|
579 | (3) |
|
9 ADAPT table of contents of December 10, 2004 treatment-effects monitoring committee meeting |
|
|
582 | (2) |
|
10 ADAPT Steering Committee meeting materials; August 2, 2005 meeting |
|
|
584 | (1) |
|
11 Alzheimer's Disease Anti-inflammatory Prevention Trial Participant Prototype Consent Statement for Enrollment (February 7, 2002; PPM 34) |
|
|
585 | (4) |
|
12 ADAPT training meeting; March 1, 2002 |
|
|
589 | (2) |
|
|
591 | (3) |
|
1 Published literature databases |
|
|
591 | (1) |
|
2 Clinical trials registration sites |
|
|
592 | (1) |
|
|
593 | (1) |
|
|
593 | (1) |
|
|
593 | (1) |
|
|
594 | (5) |
References |
|
599 | (30) |
Index |
|
629 | |