Preface |
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xi | |
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1 | (15) |
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2 | (2) |
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4 | (2) |
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1.3 Genetic Character of Breeds |
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6 | (3) |
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1.4 Why Breeds Are Important |
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9 | (3) |
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1.5 Sustaining Breeds over Time |
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12 | (4) |
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16 | (23) |
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16 | (2) |
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18 | (18) |
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19 | (5) |
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2.2.2 Standardized Breeds |
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24 | (4) |
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2.2.3 Modern "Type" and "Designer" Breeds |
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28 | (1) |
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29 | (2) |
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31 | (2) |
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33 | (1) |
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34 | (1) |
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34 | (2) |
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36 | (3) |
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3 Breeds as Gene Pools: Variability and Predictability |
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39 | (25) |
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40 | (3) |
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43 | (3) |
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3.3 Subgroups within a Breed: Bloodlines, Strains, and Varieties |
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46 | (5) |
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3.4 Gene Flow into and out of Breeds |
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51 | (13) |
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3.4.1 Upgrading and What It Does |
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53 | (8) |
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3.4.2 Upgrading and Bloodlines |
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61 | (3) |
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4 Defining an Individual Breed |
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64 | (20) |
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4.1 Which Animals to Include |
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64 | (10) |
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74 | (3) |
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77 | (1) |
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4.4 Geography and Source Herds |
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78 | (2) |
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4.5 Recovery of Purebred Animals into Registries |
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80 | (4) |
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4.5.1 Native on Appearance |
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82 | (2) |
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84 | (18) |
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84 | (3) |
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5.2 Different Sorts of Breed Standards |
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87 | (5) |
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5.3 Breed Type Reproduces Breed Type |
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92 | (1) |
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5.4 Developing a Breed Standard |
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93 | (1) |
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5.5 Breed Standards and Genetic Diversity |
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94 | (3) |
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5.6 Breed Standards and Breed Loss |
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97 | (1) |
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5.7 Standard Traits That Can Be Detrimental |
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98 | (1) |
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5.8 Qualitative and Quantitative Traits |
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99 | (1) |
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5.9 Changes to the Breed Standard |
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100 | (2) |
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6 Principles of Genetic Management |
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102 | (20) |
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6.1 Linebreeding and Inbreeding |
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103 | (4) |
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6.2 Outcrossing: Crossbreeding and Linecrossing |
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107 | (2) |
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6.3 Defining Matings as "Related" or "Unrelated" |
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109 | (3) |
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6.4 Linebreeding or Outcrossing: Which Is Best? |
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112 | (7) |
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6.5 Rational Crossbreeding |
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119 | (3) |
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7 Selection as a Genetic Management Tool |
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122 | (14) |
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125 | (2) |
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7.2 Selection and Breed-Specific Traits |
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127 | (2) |
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129 | (1) |
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130 | (4) |
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134 | (2) |
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8 Evaluating Individual Animals |
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136 | (17) |
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137 | (2) |
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139 | (2) |
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8.3 Non-Competitive Exhibition |
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141 | (1) |
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142 | (11) |
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144 | (4) |
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8.4.2 Temperament and Behavior |
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148 | (2) |
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150 | (1) |
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8.4.4 Comprehensive Strategies |
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151 | (2) |
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9 Practical Aspects of Genetic Management |
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153 | (13) |
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9.1 Selection of Animals for Reproduction |
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153 | (1) |
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9.2 Pairing of Animals within Purebred Breeds |
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154 | (5) |
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9.3 Strategic Selection of Specific Mates |
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159 | (1) |
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9.4 Strategic Use of Coefficients of Inbreeding |
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160 | (1) |
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9.5 Use of Estimated Breeding Values |
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161 | (1) |
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9.6 Breeding Goals for Various Sorts of Breeders |
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162 | (1) |
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9.7 Poultry Breeds and Breeders |
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163 | (3) |
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10 Assisted Reproduction Techniques |
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166 | (12) |
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10.1 Artificial Insemination |
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166 | (4) |
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170 | (1) |
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10.3 In Vitro Fertilization |
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171 | (1) |
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171 | (1) |
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172 | (6) |
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10.5.1 Selection of Samples and Numbers to Conserve |
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174 | (2) |
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10.5.2 Sampling Standardized Breeds |
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176 | (1) |
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10.5.3 Sampling Landraces |
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176 | (1) |
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10.5.4 Sampling Feral Populations |
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177 | (1) |
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178 | (5) |
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183 | (29) |
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184 | (9) |
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12.1.1 Numbers of Animals |
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185 | (4) |
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12.1.2 Monitoring Bloodlines, Strains, and Families |
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189 | (1) |
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12.1.3 Monitoring Health Issues |
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190 | (3) |
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193 | (13) |
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12.2.1 DNA: Microsatellites |
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194 | (7) |
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12.2.2 DNA: Single Nucleotide Polymorphisms (SNPs) |
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201 | (1) |
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202 | (1) |
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12.2.4 DNA: Y Chromosomes |
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203 | (1) |
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12.2.5 Other Uses of DNA Technology |
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203 | (3) |
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12.3 Pedigree-Based Analyses |
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206 | (4) |
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12.3.1 Pedigree-Based Inbreeding Coefficients |
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206 | (1) |
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12.3.2 Pedigree-Based Kinship Levels |
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207 | (1) |
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12.3.3 Foundation Bloodline Analysis |
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207 | (2) |
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12.3.4 Popular (or Rare) Sires (or Dams) |
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209 | (1) |
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210 | (2) |
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13 Maintaining Breeds for Long-Term Success |
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212 | (23) |
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212 | (2) |
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13.2 Monitoring Effective Population Size |
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214 | (3) |
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217 | (3) |
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13.4 Inbreeding and Loss of Diversity |
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220 | (2) |
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13.5 Monitoring Inbreeding |
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222 | (1) |
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13.6 Inbreeding within Individual Herds |
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223 | (1) |
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13.7 Inbreeding within Breeds |
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224 | (3) |
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13.8 Combining Linebreeding and Linecrossing |
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227 | (1) |
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13.9 Inbreeding and Linebreeding to Expand Rare Genetics |
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228 | (2) |
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13.10 Managing Contributions of Individual Animals |
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230 | (5) |
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14 Specific Plans for Maintenance Breeding |
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235 | (26) |
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14.1 "Regular" Conservation Breeding |
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235 | (5) |
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14.2 Variations on "Regular" Conservation Breeding |
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240 | (4) |
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14.2.1 Strategies for Tracking Animals to Manage Bloodlines |
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241 | (1) |
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14.2.2 Small Populations with Single Males |
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242 | (1) |
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14.2.3 Managing Populations Where Males Have Long Careers |
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242 | (2) |
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14.3 Species Considerations for Conservation Breeding |
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244 | (4) |
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244 | (2) |
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246 | (1) |
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246 | (1) |
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246 | (1) |
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14.3.5 Horses and Donkeys |
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247 | (1) |
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248 | (1) |
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14.4 Rotational Breeding or Spiral Breeding |
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248 | (4) |
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14.5 Poultry Plans (except Geese!) |
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252 | (6) |
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255 | (2) |
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14.5.2 Sequential Rotation of Male Poultry |
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257 | (1) |
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14.5.3 Only Two Lines Available: Poultry, Swine, and Rabbits |
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257 | (1) |
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14.5.4 "Double Mating" of Poultry |
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257 | (1) |
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14.6 Trio Breeding Plan for Rabbits and Others |
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258 | (3) |
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15 Rescuing Small Populations: General Aspects |
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261 | (9) |
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15.1 General Guiding Principles |
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263 | (4) |
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15.2 Subdivision of Populations |
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267 | (1) |
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15.3 Species-Specific Considerations |
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268 | (2) |
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16 Specific Plans for Rescue Breeding |
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270 | (36) |
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16.1 One Male, Several Females |
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271 | (6) |
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275 | (2) |
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16.2 One Male, Several Females, Some Inbreeding Depression |
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277 | (4) |
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16.2.1 Palmer-Dunn Pineywoods Cattle |
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280 | (1) |
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16.3 Multiple Males, Multiple Females, All Variably Inbred |
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281 | (4) |
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16.3.1 Randall Lineback Cattle |
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283 | (2) |
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16.4 One Male, Multiple Herds of Females |
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285 | (3) |
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16.4.1 Criollo Macabeo Cattle |
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287 | (1) |
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16.5 One Large Herd with Satellite Populations |
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288 | (3) |
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16.5.1 Marsh Tacky Horses |
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290 | (1) |
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16.6 Breeds with Multiple Rare Bloodlines |
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291 | (6) |
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16.6.1 Choctaw/Cherokee/Huasteca Horses |
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291 | (2) |
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16.6.2 Rare Strain Pineywoods Cattle |
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293 | (1) |
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294 | (3) |
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16.7 Too Few Animals for Stand-Alone Conservation |
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297 | (1) |
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16.7.1 Eggerton Myotonic Goats |
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298 | (1) |
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16.8 Single Animal of Conservation Interest |
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298 | (4) |
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16.8.1 Glendhu Leicester Longwool Sheep |
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300 | (2) |
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16.9 Frozen Semen Available from Historic Stores |
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302 | (2) |
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302 | (2) |
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16.10 Managing a Genetic Defect |
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304 | (2) |
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16.10.1 Akhal-Teke Naked Foal Syndrome |
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304 | (2) |
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17 Putting the Lessons Together: Dexter Cattle |
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306 | (9) |
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18 External Factors Affecting Breeds |
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315 | (22) |
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315 | (5) |
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320 | (2) |
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322 | (2) |
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324 | (13) |
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18.4.1 Imports That Contribute Substantially to Conservation Efforts |
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325 | (4) |
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18.4.2 Imports That Enhance American Bloodlines |
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329 | (1) |
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18.4.3 Imports That Hamper Conservation in the Country of Origin |
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329 | (1) |
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18.4.4 Imports That Endanger American Bloodlines and Breeds |
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329 | (7) |
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18.4.5 Assessment of Importations |
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336 | (1) |
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19 General Principles for Breed Associations |
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337 | (17) |
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19.1 Purposes of Associations |
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339 | (1) |
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340 | (1) |
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19.3 Breed Associations for Endangered Breeds |
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341 | (1) |
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341 | (2) |
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19.5 Multiple Breed Associations |
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343 | (3) |
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346 | (1) |
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19.7 Educational Programs |
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346 | (1) |
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347 | (1) |
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19.9 Recruiting and Training New Breeders |
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348 | (2) |
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350 | (1) |
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351 | (1) |
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19.12 Assuring Continuity |
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352 | (2) |
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20 Practical Details of Breed Associations |
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354 | (15) |
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20.1 Forms of Association |
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354 | (4) |
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20.1.1 Private Associations |
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354 | (2) |
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20.1.2 Unincorporated Associations |
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356 | (1) |
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20.1.3 Incorporated Associations |
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357 | (1) |
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358 | (1) |
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359 | (1) |
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20.3.1 Directors and Officers |
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360 | (1) |
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20.4 Networks of Breed Associations |
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360 | (2) |
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20.5 Promoting the Association |
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362 | (1) |
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20.6 Association Responsibilities |
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362 | (5) |
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20.6.1 Conservation Responsibilities |
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363 | (1) |
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20.6.2 Reporting Pedigree Information |
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363 | (2) |
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20.6.3 Reporting Breed Health Status |
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365 | (1) |
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20.6.4 Reporting Measures of Genetic Diversity |
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365 | (1) |
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20.6.5 Programs to Save Herds in Peril |
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365 | (1) |
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20.6.6 Development of Long-Range Conservation Plans |
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366 | (1) |
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20.6.7 Dispelling False Rumors Quickly |
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367 | (1) |
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20.7 Conflict of Interest |
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367 | (1) |
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20.8 Local and Regional Groups |
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368 | (1) |
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369 | (17) |
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369 | (1) |
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370 | (3) |
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21.3 Pedigree Recording Systems |
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373 | (1) |
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374 | (1) |
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375 | (1) |
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21.6 Selective Recording Systems |
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375 | (1) |
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21.7 Registrations Are Important |
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376 | (1) |
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21.8 Closed Herd Book Registries |
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377 | (2) |
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21.9 Open Herd Book Registries |
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379 | (2) |
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21.10 Registration of Crossbreds and Partbreds |
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381 | (2) |
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21.11 Registration for Extensively Raised Landraces |
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383 | (1) |
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21.12 Starting a Registry |
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384 | (2) |
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22 Breeder Responsibilities |
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386 | (8) |
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388 | (4) |
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22.2 Breeds, Breeders, Associations, and the Future |
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392 | (2) |
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Appendix 1 Phenotypic Matrix for Colonial Spanish Horses |
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394 | (3) |
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Appendix 2 A Protocol for Bloodline Analysis |
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397 | (2) |
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Appendix 3 A Protocol for Assessing Popular Sires or Dams |
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399 | (2) |
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401 | (7) |
Index |
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408 | |